Alignment of NM_177692 and chr7:16504518-16506399
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frame to left to navigate through alignment. Matching bases in coding regions of
cDNA and genomic sequences are colored blue and capitalized. Matching bases in
UTR regions of cDNA and genomic sequences are colored red and capitalized. Light
blue (coding) or orange (UTR) bases mark the boundaries of gaps in either side
of the alignment (often splice sites).
cDNA NM_177692
gTCCGCCAGG CAGCGGACCC CTTGGGCTCG GAGCCTCGGA GACCCGCTCC 50
GTGCCATGGA GTCATCCCAG GGTCGGCGGA GAAGGCCGGG GACAGTGGTA 100
CCTGGGGAAG CTGCGGAGAC CGACTCGGAG CTGTCTGCAT CCTCGTCCGA 150
GGAGGAACTA TACCTGGGTC CCTCGGGCCC TACGCGCGGC CGTCCCACGG 200
GGCTGCGTGT GGCCGGGGAG GCGGCGGAGA CCGACTCGGA GCCTGAGCCC 250
GAGCCCACGG TTGTGCCGGT CGACCTGCCC CCGCTCGTGG TGCAGCGCGA 300
TCCGGCGGAG ACTTGGGGCA CGGAGGAGAC CCCTGCCATG GCGCCTGCGC 350
GCTCGCTGCT GCAGCTCCGG TTGGCTGAGA GCCAGACGCG CCTGGACCAC 400
GACGTAnCGG CTGCGGTGAG CGGCGTGTAC CGCCGTGCGG GTCGCGATGT 450
GGCCGCCCTG GCGGGGAGGC TGGCGGCTGC TCAGGCCACC GGGCTGGCAG 500
CCGCCCACAG CGTGCGCCTG GCGCGCGGGG ACCTCTGCGC GCTCGCCGAG 550
CGCCTGGATA TCGTGGCTGG CTGTCGCTTG CTGCCGGACA TACGAGGGGT 600
CCCTGGTATG GAGCCCGAGC AGGACCCGGG ACCTAGAGCC TAGGCTGTCA 650
CTCTGTGTCC CCCCACCTGA CTCTGCCTCT TGGTGAACAT TCGTACCACC 700
TGTGGCATCT GACTCTGTTT TTGTTCCTGG ATCACCGAGG CCTCCAATGC 750
GTGGTAGCAT TTGATCAATG CCGACAGAAG CCGAATCCTC GCATCTTCTT 800
TGATATTCTT AGCACAATTC CGGGCTCCCC AACCCAGGTT CTGTGGCTAT 850
CAAGTAGCTT AGCCCCTATC CATTCTGGTC CTGTTTCCTA AATTCAGCTT 900
TACTCTTGGG CAAAGCCAGA GGTTTGCTTT CTTTTGTTGA GCCTTTCTGA 950
ATTTAGGCTT TGGGGGGTAG TGGTGTCTCT CTAGTTTACA TCCCTAAATG 1000
ATGATCACTC CTGACCCGAG GATACCTTCC TCTTACACAT ATCCCTCTTA 1050
CCGACCGCTG TGGCCAAATG CAGACCAACC TAGGGCCTGG GTAGTAACCC 1100
TAATTCTTAG GCCTTTGTGT CAGGGGCAGC GCCTCCTGGT GTTTTGATCG 1150
CTATAGAGAC ATGACACCAC AAATACAAAT CTACCACTC
Genomic chr7 :
caaataaata aataaaccca cactacggaa gcgacttgtc taaccgcttt 16504467
cctattggcc ataactcggc tcacgtgacg ctgcgagaga ccggctcact 16504517
TCCGCCAGGC AGCGGACCCC TTGGGCTCGG AGCCTCGGAG ACCCGgtatg 16504567
gccttccttc cgggactctg gtgtcggtgg ctcttgttaa gggtcccctc 16504617
gggcggctgt cctttctgtt tgccctggtg cctattgcgg ccaagtgctc 16504667
gctggccagg aggacagtgg agggtgtggc ctgtgctggt gggactctgg 16504717
gaactcttgg ttacaaagct tttaaaactt actttattat tgtcagtatt 16504767
attttgagac aagttctcac tatgtatgta atgttggatg gcctggcact 16504817
attgaggatc aggctgatct cgaactcaca gagatcttcc tgcctctcct 16504867
ccggtgctgg gaattaaagt cattattatt attttatatt agttaatgta 16504917
tatatacgcg tgcgtctcta gcacgcgtgt agagctcaga ggacaactgt 16504967
acgggcctca gttcgcttct tccaccatgt gggtccctgg gttcgaactc 16505017
ttggcgtcag gtttgattgc aagtgccttt tcccagctga gccatctcgt 16505067
gtgacctagt tctaaggctt tgcctggacg gtccttgatg tccccggtgt 16505117
gcacacaaat gatacagagg tgcacaattc caacccatgt gtacacgagg 16505167
aaactgaggc ccaagtcagg actcgctggg gatggcggtg aaggggctgg 16505217
gactcgggac ctcacgtccg ctcaattcct cttctccagC TCCGTGCCAT 16505267
GGAGTCATCC CAGGGTCGGC GGAGAAGGCC GGGGACAGTG GTACCTGGGG 16505317
AAGCTGCGGA GACCGACTCG GAGCTGTCTG CATCCTCGTC CGAGGAGGAA 16505367
CTATACCTGG GTCCCTCGGG CCCTACGCGC GGCCGTCCCA CGGGGCTGCG 16505417
TGTGGCCGGG GAGGCGGCGG AGACCGACTC GGAGCCTGAG CCCGAGCCCA 16505467
CGGTTGTGCC GGTCGACCTG CCCCCGCTCG TGGTGCAGCG CGATCCGGCG 16505517
GAGACTTGGG GCACGGAGGA GACCCCTGCC ATGGCGCCTG CGCGCTCGCT 16505567
GCTGCAGCTC CGGTTGGCTG AGAGCCAGAC GCGCCTGGAC CACGACGTAg 16505617
CGGCTGCGGT GAGCGGCGTG TACCGCCGTG CGGGTCGCGA TGTGGCCGCC 16505667
CTGGCGGGGA GGCTGGCGGC TGCTCAGGCC ACCGGGCTGG CAGCCGCCCA 16505717
CAGCGTGCGC CTGGCGCGCG GGGACCTCTG CGCGCTCGCC GAGCGCCTGG 16505767
ATATCGTGGC TGGCTGTCGC TTGCTGCCGG ACATACGAGG GGTCCCTGGT 16505817
ATGGAGCCCG AGCAGGACCC GGGACCTAGA GCCTAGGCTG TCACTCTGTG 16505867
TCCCCCCACC TGACTCTGCC TCTTGGTGAA CATTCGTACC ACCTGTGGCA 16505917
TCTGACTCTG TTTTTGTTCC TGGATCACCG AGGCCTCCAA TGCGTGGTAG 16505967
CATTTGATCA ATGCCGACAG AAGCCGAATC CTCGCATCTT CTTTGATATT 16506017
CTTAGCACAA TTCCGGGCTC CCCAACCCAG GTTCTGTGGC TATCAAGTAG 16506067
CTTAGCCCCT ATCCATTCTG GTCCTGTTTC CTAAATTCAG CTTTACTCTT 16506117
GGGCAAAGCC AGAGGTTTGC TTTCTTTTGT TGAGCCTTTC TGAATTTAGG 16506167
CTTTGGGGGG TAGTGGTGTC TCTCTAGTTT ACATCCCTAA ATGATGATCA 16506217
CTCCTGACCC GAGGATACCT TCCTCTTACA CATATCCCTC TTACCGACCG 16506267
CTGTGGCCAA ATGCAGACCA ACCTAGGGCC TGGGTAGTAA CCCTAATTCT 16506317
TAGGCCTTTG TGTCAGGGGC AGCGCCTCCT GGTGTTTTGA TCGCTATAGA 16506367
GACATGACAC CACAAATACA AATCTACCAC TCactgtgtc tctttctgga 16506417
tgctaaaagg acttggattc tgacctctat gggcctcgag gataacaggt 16506467
tctttttgcc tctttgggtt tggctctttg gg
Side by Side Alignment
00000002 tccgccaggcagcggaccccttgggctcggagcctcggagacccg 00000046
>>>>>>>> ||||||||||||||||||||||||||||||||||||||||||||| <<<<<<<<
16504518 tccgccaggcagcggaccccttgggctcggagcctcggagacccg 16504562
00000047 ctccgtgccatggagtcatcccagggtcggcggagaaggccggggacagt 00000096
>>>>>>>> |||||||||||||||||||||||||||||||||||||||||||||||||| <<<<<<<<
16505257 ctccgtgccatggagtcatcccagggtcggcggagaaggccggggacagt 16505306
00000097 ggtacctggggaagctgcggagaccgactcggagctgtctgcatcctcgt 00000146
>>>>>>>> |||||||||||||||||||||||||||||||||||||||||||||||||| <<<<<<<<
16505307 ggtacctggggaagctgcggagaccgactcggagctgtctgcatcctcgt 16505356
00000147 ccgaggaggaactatacctgggtccctcgggccctacgcgcggccgtccc 00000196
>>>>>>>> |||||||||||||||||||||||||||||||||||||||||||||||||| <<<<<<<<
16505357 ccgaggaggaactatacctgggtccctcgggccctacgcgcggccgtccc 16505406
00000197 acggggctgcgtgtggccggggaggcggcggagaccgactcggagcctga 00000246
>>>>>>>> |||||||||||||||||||||||||||||||||||||||||||||||||| <<<<<<<<
16505407 acggggctgcgtgtggccggggaggcggcggagaccgactcggagcctga 16505456
00000247 gcccgagcccacggttgtgccggtcgacctgcccccgctcgtggtgcagc 00000296
>>>>>>>> |||||||||||||||||||||||||||||||||||||||||||||||||| <<<<<<<<
16505457 gcccgagcccacggttgtgccggtcgacctgcccccgctcgtggtgcagc 16505506
00000297 gcgatccggcggagacttggggcacggaggagacccctgccatggcgcct 00000346
>>>>>>>> |||||||||||||||||||||||||||||||||||||||||||||||||| <<<<<<<<
16505507 gcgatccggcggagacttggggcacggaggagacccctgccatggcgcct 16505556
00000347 gcgcgctcgctgctgcagctccggttggctgagagccagacgcgcctgga 00000396
>>>>>>>> |||||||||||||||||||||||||||||||||||||||||||||||||| <<<<<<<<
16505557 gcgcgctcgctgctgcagctccggttggctgagagccagacgcgcctgga 16505606
00000397 ccacgacgtancggctgcggtgagcggcgtgtaccgccgtgcgggtcgcg 00000446
>>>>>>>> |||||||||| ||||||||||||||||||||||||||||||||||||||| <<<<<<<<
16505607 ccacgacgtagcggctgcggtgagcggcgtgtaccgccgtgcgggtcgcg 16505656
00000447 atgtggccgccctggcggggaggctggcggctgctcaggccaccgggctg 00000496
>>>>>>>> |||||||||||||||||||||||||||||||||||||||||||||||||| <<<<<<<<
16505657 atgtggccgccctggcggggaggctggcggctgctcaggccaccgggctg 16505706
00000497 gcagccgcccacagcgtgcgcctggcgcgcggggacctctgcgcgctcgc 00000546
>>>>>>>> |||||||||||||||||||||||||||||||||||||||||||||||||| <<<<<<<<
16505707 gcagccgcccacagcgtgcgcctggcgcgcggggacctctgcgcgctcgc 16505756
00000547 cgagcgcctggatatcgtggctggctgtcgcttgctgccggacatacgag 00000596
>>>>>>>> |||||||||||||||||||||||||||||||||||||||||||||||||| <<<<<<<<
16505757 cgagcgcctggatatcgtggctggctgtcgcttgctgccggacatacgag 16505806
00000597 gggtccctggtatggagcccgagcaggacccgggacctagagcctaggct 00000646
>>>>>>>> |||||||||||||||||||||||||||||||||||||||||||||||||| <<<<<<<<
16505807 gggtccctggtatggagcccgagcaggacccgggacctagagcctaggct 16505856
00000647 gtcactctgtgtccccccacctgactctgcctcttggtgaacattcgtac 00000696
>>>>>>>> |||||||||||||||||||||||||||||||||||||||||||||||||| <<<<<<<<
16505857 gtcactctgtgtccccccacctgactctgcctcttggtgaacattcgtac 16505906
00000697 cacctgtggcatctgactctgtttttgttcctggatcaccgaggcctcca 00000746
>>>>>>>> |||||||||||||||||||||||||||||||||||||||||||||||||| <<<<<<<<
16505907 cacctgtggcatctgactctgtttttgttcctggatcaccgaggcctcca 16505956
00000747 atgcgtggtagcatttgatcaatgccgacagaagccgaatcctcgcatct 00000796
>>>>>>>> |||||||||||||||||||||||||||||||||||||||||||||||||| <<<<<<<<
16505957 atgcgtggtagcatttgatcaatgccgacagaagccgaatcctcgcatct 16506006
00000797 tctttgatattcttagcacaattccgggctccccaacccaggttctgtgg 00000846
>>>>>>>> |||||||||||||||||||||||||||||||||||||||||||||||||| <<<<<<<<
16506007 tctttgatattcttagcacaattccgggctccccaacccaggttctgtgg 16506056
00000847 ctatcaagtagcttagcccctatccattctggtcctgtttcctaaattca 00000896
>>>>>>>> |||||||||||||||||||||||||||||||||||||||||||||||||| <<<<<<<<
16506057 ctatcaagtagcttagcccctatccattctggtcctgtttcctaaattca 16506106
00000897 gctttactcttgggcaaagccagaggtttgctttcttttgttgagccttt 00000946
>>>>>>>> |||||||||||||||||||||||||||||||||||||||||||||||||| <<<<<<<<
16506107 gctttactcttgggcaaagccagaggtttgctttcttttgttgagccttt 16506156
00000947 ctgaatttaggctttggggggtagtggtgtctctctagtttacatcccta 00000996
>>>>>>>> |||||||||||||||||||||||||||||||||||||||||||||||||| <<<<<<<<
16506157 ctgaatttaggctttggggggtagtggtgtctctctagtttacatcccta 16506206
00000997 aatgatgatcactcctgacccgaggataccttcctcttacacatatccct 00001046
>>>>>>>> |||||||||||||||||||||||||||||||||||||||||||||||||| <<<<<<<<
16506207 aatgatgatcactcctgacccgaggataccttcctcttacacatatccct 16506256
00001047 cttaccgaccgctgtggccaaatgcagaccaacctagggcctgggtagta 00001096
>>>>>>>> |||||||||||||||||||||||||||||||||||||||||||||||||| <<<<<<<<
16506257 cttaccgaccgctgtggccaaatgcagaccaacctagggcctgggtagta 16506306
00001097 accctaattcttaggcctttgtgtcaggggcagcgcctcctggtgttttg 00001146
>>>>>>>> |||||||||||||||||||||||||||||||||||||||||||||||||| <<<<<<<<
16506307 accctaattcttaggcctttgtgtcaggggcagcgcctcctggtgttttg 16506356
00001147 atcgctatagagacatgacaccacaaatacaaatctaccactc 00001189
>>>>>>>> ||||||||||||||||||||||||||||||||||||||||||| <<<<<<<<
16506357 atcgctatagagacatgacaccacaaatacaaatctaccactc 16506399