CONREAL

CONREAL ALIGNMENT

                  10        20        30        40        50        60        70        80        90       100
seq1      aatggcttgaaatagtggctactatggttgcaccataggaaaagtggggacaggtgacaagtgAGACTCAGTCCTCAGGGTGGAGACAGTcagggtagga
          || ||  || |     ||  | |  |  |                                  ||| |||||| |||| | |||||              
seq2      aaaggagtggagagaaggagaatcagtctaggg------------------------------AGAATCAGTCTTCAGAGAGGAGATTAG----------
                  10        20        30                                      40        50        60          

                 110       120       130       140       150       160       170       180       190       200
seq1      gggctggggataaggggtagctggcgtgtgtgtgtatgtactggcatcggggtggggtgagagggtgcagagggAGGATAACCAgggatAAGAAAAgaaa
                                                                                    |||||||||| |  ||||  ||    
seq2      --------------------------------------------------------------------------AGGATAACCAagactAAGTTAAactt
                                                                                            70        80      

                               210       220       230       240          250       260       270       280   
seq1      ctac--------------CAAGATTTTGGGTGTCCAGGAGCCTGCCTGAGgcctgctg---AATATCTCCTATCCCTTCTTCTGTGGCCTTtatccctcc
             |               |||||||||| ||  ||||||||||| |   |    |      | | ||| |  ||| ||| | ||| |  | || ||   
seq2      agtcaaaaactctacactTAAGATTTTGGATGCTCAGGAGCCTGCATCCTgaaaacccttaCACACCTCTTTCCCCCTCTCCAGTGACTCTcattccc--
            90       100       110       120       130       140       150       160       170       180      

              290       300       310       320       330       340       350       360             370       
seq1      TCATTTTGcaccttcaattgctccccagtcacttctTCTCATCCATCTCTTTCACTCACTCCTGTTCTCCCatcccattaagt------ACTCTGTAcac
          |||   ||  ||                        |   || |||| || |||| | | ||||||||| |  |||             | || ||| ||
seq2      TCACACTGagcc------------------------TTCTATTCATCCCTGTCACCCCCACCTGTTCTCACcacccccctcccccaagcATTCCGTAaac
             190                               200       210       220       230       240       250       260

          380       390       400       410       420       430       440       450       460       470       
seq1      ctaggaggcttgtgaaacagcttAAATGCAATTAAGATAACCAGAgtgtatcctcagccctaaaaaagttacagtctaaGCTTTCTTCAAGgaaggctgT
          |    || |  ||| |||| || || |  ||| |||||||||   ||||       | |  ||                | || |||||||  |||   |
seq2      ccgctagacgcgtgcaacaact-AAGTATAATCAAGATAACCTATgtgtcagtgacgtcggaa----------------GTTTCCTTCAAGagaggtccT
                 270       280        290       300       310       320                       330       340   

          480       490       500       510       520       530       540       550       560       570       
seq1      ATCAACTGAAGAGaagtagATGCCTGCCTGCAGTTTAAGAAATAGGGGCCAGTGAGTTGGTGttaactcaggacattgggagggacagtatttaggacca
           |||||| || |  ||     ||  || |||| || |||| ||  | | ||| |||||| |  ||   || | | |  ||                 |||
seq2      TTCAACTAAACATtag---GGGCTAGCTTGCACTTCAAGAGATGTGAGTCAGAGAGTTGATActagtccaaggcctatgggaaaggtaagggagattcca
              350          360       370       380       390       400       410       420       430       440

          580       590                                                                 600       610         
seq1      gggatcaatgcctgaaggtttc----------------------------------------------------------CCAAAGTGtgga--------
             |  |        |                                                                 ||||||| |          
seq2      tcaagaatcaaggccaaagccgggcggtggtggcacatgcctttaatccctgatttctgagtttgaggccagcctggtctACAAAGTGagttccaagaca
                 450       460       470       480       490       500       510       520       530       540

                                                                                             620       630    
seq1      -----------------------------------------------------------------------------CGAGACAACCTGTAaaactttGG
                                                                                        |||||| |||||||||     |
seq2      gccagggctacacagaaaaatcctgtctcgaaaaaccaaaaaaaaaaaaaaagaagattcaaggccgaaatcttgtgGGAGACACCCTGTAaaag---CG
                 550       560       570       580       590       600       610       620       630          

             640       650       660       670            680       690       700       710       720       73
seq1      ATTCCCTGAGCAATCTTTTGATGACTAACTccagtg-----CGGAGTGTCAGGAGAGCgggcaatccgtcttcagtggttttggtcagcaggccacaaac
          | ||||||| ||||  ||||||||  ||  |  ||          ||||| || |||  ||| | |  ||| || |   ||| |    || |  |  |  
seq2      AATCCCTGAACAATTCTTTGATGAACAAAAcatgtcagggtGCTGGTGTCTGGGGAGGaggccacctctctccaataactttagctgacatgttatgatg
          640       650       660       670       680       690       700       710       720       730       

          0       740       750       760       770       780       790       800       810       820       83
seq1      agggttgactattcccAGACGGGTCGTGAGTGGtacaagATGAGTGATCcctcCAGGGTGTGACTGTAGGGATGAgctcgccctcagtcccagacgtcgc
           |     |        |||| || ||||  |||      |  ||||| |  || || ||||| ||| ||||| || | |     ||  |    ||   | 
seq2      ggtccacaaccca---AGACAGGCCGTGGCTGGc-----ACAAGTGACCgttcTAGAGTGTGGCTGCAGGGACGAacgcattgccaaccaggtactgtga
          740       750          760            770       780       790       800       810       820       83

          0       840       850       860       870       880       890       900       910       920       93
seq1      gactgttggcagtggatCAATTCACaacagcctggcGTAGCTTCAATTTCGGCTCCggaatcgccctttgctgtgtcatagacctgaggctggactggac
                |  | |      ||||| ||| ||||     |||||||| |||| ||| |    | |  ||||| |      |     |  |    |       
seq2      tctcagtaacgggc---TAATTCGCaatagcc----TTAGCTTCAGTTTCAGCTTCatgcttggactttgataaaaggtccttatttgaggtgtgacttg
          0       840          850           860       870       880       890       900       910       920  

          0       940       950               960       970       980       990         1000      1010      10
seq1      cgctaggcgcaggactgcagggccg--------GCCGGGTGGGCGGGGCACACCCagTGCGCATGCGCAGCACCCc---GGCCCGGAAACagcgcggggt
           || || ||    |    |||              |||  ||||||||||| | | | ||||| ||||||   |||   |  |||||| ||||   ||||
seq2      ggcaagccgatcaaagcaaggaagctgtgagcaAGCGGCGGGGCGGGGCACCCGCggGGCGCACGCGCAGATGCCcttaGAACCGGAAGCagccttgggt
               930       940       950       960       970       980       990      1000      1010      1020  

          20    
seq1      ccgct-
          |     
seq2      cg---G
                

CONREAL ALIGNED HITS

Matrix
Identity
Seq1 from
Seq1 to
Seq2 from
Seq2 to
Strand
Score1
Score2
Rel.Score1
Rel.Score2
Factor
Found by:
C = CONREAL
L = LAGAN
M = MAVID
B = BLASTZ
M00630*
64.10
64
72
34
42
1
5.617
7.097
0.82
0.88
Pro only
C L M
M00314*
65.79
66
73
36
43
1
6.299
4.600
0.89
0.81
Pro only
C L M
M00313*
65.79
66
73
36
43
1
6.105
4.414
0.89
0.81
Pro only
C L M
M00315*
65.79
66
73
36
43
1
6.570
4.758
0.91
0.83
Pro only
C L M
M00253
63.16
68
75
38
45
1
7.135
7.359
0.99
1.00
cap 
C L M
M00801*
66.67
73
78
43
48
1
4.873
4.873
0.82
0.82
Pro only
C L M
M00314*
63.16
73
80
43
50
1
4.371
4.347
0.80
0.80
Pro only
C L M
M00083
57.89
77
84
47
54
1
6.967
6.396
0.85
0.82
MZF1 
C L M
M00935*
57.50
80
89
50
59
1
6.821
6.117
0.83
0.80
Pro only
C L
MA0109
57.89
83
90
53
60
2
5.123
5.521
0.83
0.84
RUSH1-alfa
C only
M00655*
54.05
175
181
61
67
2
5.359
5.359
0.81
0.81
Pro only
C L M
MA0098
52.78
175
180
61
66
2
7.229
7.229
0.97
0.97
c-ETS
C L M
MA0037
55.56
176
181
62
67
1
5.017
5.017
0.86
0.86
GATA-3
C L M
MA0035
55.56
176
181
62
67
1
4.642
4.642
0.87
0.87
GATA-1
C L M
MA0036
54.29
176
180
62
66
1
6.651
6.651
1.00
1.00
GATA-2
C L M
M00789*
54.05
176
182
62
68
1
6.466
6.466
0.87
0.87
Pro only
C L M
M00396
54.05
176
182
62
68
2
4.063
4.063
0.83
0.83
En-1 
C L M
MA0089
55.56
177
182
63
68
1
4.925
4.925
0.83
0.83
TCF11-MafG
C L M
M00101
54.05
178
184
64
70
1
3.818
3.818
0.85
0.85
CdxA 
C L M
M00747*
59.46
190
196
76
82
2
5.565
6.834
0.80
0.85
Pro only
C only
M00462*
67.50
205
214
105
114
1
5.811
5.532
0.86
0.84
Pro only
C L
M00076
67.50
205
214
105
114
1
4.948
4.682
0.83
0.82
GATA-2 
C L
M00734*
69.23
206
214
106
114
2
5.566
5.566
0.80
0.80
Pro only
C L M
M00077
69.23
206
214
106
114
1
6.417
6.417
0.85
0.85
GATA-3 
C L M
M00101
67.57
206
212
106
112
2
3.208
3.208
0.83
0.83
CdxA 
C L M
MA0037
66.67
207
212
107
112
1
5.457
5.457
0.88
0.88
GATA-3
C L M
MA0035
66.67
207
212
107
112
1
4.474
4.474
0.86
0.86
GATA-1
C L M
MA0036
65.71
207
211
107
111
1
4.454
4.454
0.87
0.87
GATA-2
C L M
M00690*
71.05
209
216
109
116
2
5.331
6.363
0.83
0.87
Pro only
C L M
M00396
70.27
209
215
109
115
1
3.739
3.739
0.81
0.81
En-1 
C L M
M00253
68.42
212
219
112
119
2
2.977
3.419
0.82
0.84
cap 
C L M
M00450*
66.67
213
221
113
121
1
7.793
6.580
0.86
0.81
Pro only
C L M
M00726*
69.44
221
226
121
126
1
5.105
5.105
0.84
0.84
Pro only
C L M
MA0103
69.44
221
226
121
126
2
5.333
5.333
0.84
0.84
deltaEF1
C L M
M00963*
66.67
221
229
121
129
2
5.535
5.535
0.82
0.82
Pro only
C L M
M00733*
57.78
222
236
122
136
2
9.807
8.326
0.85
0.81
Pro only
C only
M00792*
56.41
225
233
125
133
1
5.832
5.832
0.86
0.86
Pro only
C only
M00720*
53.85
226
234
126
134
2
6.441
7.535
0.81
0.84
Pro only
C only
M00469*
53.85
226
234
126
134
1
4.634
5.372
0.81
0.84
Pro only
C only
MA0003
53.85
226
234
126
134
1
4.634
5.372
0.81
0.84
AP2alpha
C only
MA0109
55.26
245
252
148
155
1
8.287
4.685
0.96
0.81
RUSH1-alfa
C L M
MA0039
52.50
252
261
155
164
2
7.473
7.901
0.88
0.89
Gklf
C L M
M00986*
52.78
255
260
158
163
2
3.573
6.042
0.80
0.91
Pro only
C L M
MA0039
57.50
257
266
160
169
2
8.934
5.667
0.92
0.82
Gklf
C L M
M00964*
59.52
263
274
166
177
2
5.578
8.918
0.81
0.90
Pro only
C L M
M00253
50.00
284
291
185
192
1
5.363
5.325
0.92
0.91
cap 
C M
M00744*
55.00
320
329
197
206
2
6.748
9.329
0.80
0.87
Pro only
C L
M00106
57.50
323
332
200
209
1
8.408
7.217
0.89
0.86
CDP CR3+HD 
C L
M00253
57.89
326
333
203
210
1
4.063
6.177
0.86
0.95
cap 
C L
MA0035
55.56
326
331
203
208
2
6.922
5.498
0.99
0.91
GATA-1
C L
M00704*
58.33
327
332
204
209
2
7.479
7.955
0.95
0.97
Pro only
C L M
MA0036
57.14
327
331
204
208
2
5.559
5.978
0.94
0.96
GATA-2
C L M
MA0067
68.42
333
340
210
217
1
5.370
5.060
0.85
0.84
Pax-2
C L M
M00253
68.42
335
342
212
219
1
5.713
6.123
0.93
0.95
cap 
C L M
M00963*
69.23
339
347
216
224
1
5.009
6.082
0.80
0.84
Pro only
C L M
M00413
64.29
339
350
216
227
1
8.302
10.003
0.83
0.88
AREB6 
C L M
M00726*
69.44
342
347
219
224
2
5.105
7.666
0.84
0.98
Pro only
C L M
MA0103
69.44
342
347
219
224
1
5.333
9.262
0.84
1.00
deltaEF1
C L M
M00712*
65.79
342
349
219
226
2
5.846
9.546
0.81
0.95
Pro only
C L M
M00973*
65.79
342
349
219
226
1
6.262
10.567
0.82
0.97
Pro only
C L M
M01008*
64.10
342
350
219
227
1
5.945
9.762
0.82
0.93
Pro only
C L M
M00962*
61.54
343
351
220
228
2
7.260
7.260
0.90
0.90
Pro only
C L M
M00921*
60.53
344
351
221
228
1
9.012
9.012
0.96
0.96
Pro only
C L M
M00963*
58.97
344
352
221
229
1
5.724
5.724
0.83
0.83
Pro only
C L M
M00962*
58.97
345
353
222
230
2
5.485
6.905
0.83
0.89
Pro only
C only
MA0109
57.89
345
352
222
229
1
4.489
4.489
0.80
0.80
RUSH1-alfa
C L M
M00499*
57.89
345
352
222
229
1
6.810
6.810
0.94
0.94
Pro only
C L M
M00496*
57.89
345
352
222
229
1
4.623
4.623
0.83
0.83
Pro only
C L M
M00497*
57.89
345
352
222
229
1
4.994
4.994
0.86
0.86
Pro only
C L M
M00960*
57.50
345
354
222
231
2
8.864
10.613
0.91
0.97
Pro only
C only
MA0080
58.33
347
352
224
229
2
4.644
4.644
0.83
0.83
SPI-1
C L M
MA0032
55.26
367
374
250
257
1
5.823
4.916
0.91
0.86
FREAC-3
C L M
M00724*
51.22
401
411
283
293
2
6.773
5.872
0.83
0.81
Pro only
C L M
M00096
53.85
404
412
286
294
1
5.997
7.871
0.81
0.87
Pbx-1 
C L M
MA0075
57.14
406
410
288
292
2
4.766
5.937
0.82
0.87
S8
C L M
M00318*
55.26
406
413
288
295
1
8.578
7.967
0.87
0.85
Pro only
C L M
M00241
55.26
406
413
288
295
2
11.098
6.593
1.00
0.82
Nkx2-5 
C L M
M00079
51.22
407
417
289
299
1
8.873
8.873
0.80
0.80
Evi-1 
C L M
MA0063
56.76
409
415
291
297
1
6.024
4.544
0.87
0.81
Nkx
C L M
MA0033
55.26
409
416
291
298
1
6.104
5.446
0.88
0.85
FREAC-7
C L M
M00128
53.49
409
421
291
303
1
9.213
6.577
0.89
0.82
GATA-1 
C L M
M00346
52.50
410
419
292
301
1
8.800
9.441
0.87
0.89
GATA-1 
C L M
M00347
52.50
410
419
292
301
1
6.927
8.751
0.81
0.86
GATA-1 
C L M
M00348
52.50
410
419
292
301
1
8.239
8.484
0.85
0.86
GATA-2 
C L M
M00350
52.50
410
419
292
301
1
7.110
7.289
0.81
0.81
GATA-3 
C L M
M00462*
52.50
410
419
292
301
1
7.955
8.234
0.94
0.95
Pro only
C L M
M00076
52.50
410
419
292
301
1
6.209
6.475
0.88
0.89
GATA-2 
C L M
M00747*
54.05
411
417
293
299
2
5.565
5.565
0.80
0.80
Pro only
C L M
M00278
53.85
411
419
293
301
1
8.372
8.372
0.90
0.90
Lmo2 complex 
C L M
M00077
53.85
411
419
293
301
1
5.913
5.913
0.83
0.83
GATA-3 
C L M
MA0109
52.63
411
418
293
300
2
5.284
5.284
0.83
0.83
RUSH1-alfa
C L M
MA0036
57.14
412
416
294
298
1
6.232
6.232
0.98
0.98
GATA-2
C L M
MA0037
55.56
412
417
294
299
1
7.189
7.189
0.95
0.95
GATA-3
C L M
MA0035
55.56
412
417
294
299
1
4.460
4.460
0.86
0.86
GATA-1
C L M
M00789*
54.05
412
418
294
300
1
8.781
8.781
0.95
0.95
Pro only
C L M
M00396
54.05
412
418
294
300
2
4.063
4.063
0.83
0.83
En-1 
C L M
M00203
53.66
412
422
294
304
1
6.088
6.607
0.80
0.82
GATA-X 
C L M
MA0089
55.56
413
418
295
300
1
4.925
4.925
0.83
0.83
TCF11-MafG
C L M
MA0039
60.00
457
466
323
332
2
6.149
5.099
0.84
0.81
Gklf
C L M
MA0080
58.33
458
463
324
329
2
4.721
5.308
0.83
0.86
SPI-1
C L M
M00498*
63.16
460
467
326
333
1
3.804
3.804
0.81
0.81
Pro only
C L M
M00100
62.16
462
468
328
334
2
4.080
4.080
0.81
0.81
CdxA 
C L M
M00073
63.41
477
487
343
353
1
6.894
6.945
0.83
0.83
deltaEF1 
C L M
M00913*
58.97
480
488
346
354
1
7.327
5.894
0.91
0.85
Pro only
C L
M00773*
58.54
480
490
346
356
2
6.848
5.783
0.85
0.81
Pro only
C L
M00747*
59.46
481
487
347
353
2
10.025
5.982
0.97
0.82
Pro only
C L M
M00272
55.00
497
506
360
369
1
6.633
7.412
0.85
0.87
p53 
C L M
M00747*
62.16
506
512
369
375
1
6.075
6.927
0.82
0.85
Pro only
C L M
M00253
65.79
507
514
370
377
1
4.778
4.058
0.89
0.86
cap 
C L M
MA0063
64.86
512
518
375
381
1
5.612
6.122
0.85
0.87
Nkx
C L M
M00077
66.67
516
524
379
387
1
5.402
5.917
0.81
0.83
GATA-3 
C L M
M00966*
62.75
519
539
382
402
2
10.363
10.510
0.81
0.82
Pro only
C L M
M00964*
64.29
522
533
385
396
1
6.489
6.606
0.84
0.84
Pro only
C L M
M00444*
62.22
523
537
386
400
1
7.678
11.326
0.81
0.90
Pro only
C L M
M00773*
63.41
526
536
389
399
1
7.078
6.864
0.86
0.86
Pro only
C L M
M00253
63.16
526
533
389
396
1
2.761
3.460
0.81
0.84
cap 
C L M
MA0038
62.50
527
536
390
399
2
7.669
6.521
0.85
0.82
Gfi
C L M
M00913*
61.54
528
536
391
399
2
6.145
6.145
0.86
0.86
Pro only
C L M
M00183
62.50
529
538
392
401
2
5.469
6.288
0.81
0.84
c-Myb 
C L M
M00805*
50.00
600
605
521
526
1
6.066
8.180
0.84
0.94
Pro only
C L
MA0103
50.00
602
607
523
528
2
4.459
4.459
0.81
0.81
deltaEF1
C L
MA0027
53.66
612
622
618
628
2
4.646
4.914
0.81
0.82
EN-1
C L M
MA0109
57.89
613
620
619
626
2
5.458
5.123
0.84
0.83
RUSH1-alfa
C L M
M00792*
56.41
614
622
620
628
1
6.153
8.913
0.87
1.00
Pro only
C L M
M00032
52.50
615
624
621
630
2
6.551
6.551
0.82
0.82
c-Ets-1(p54) 
C L M
M00655*
54.05
616
622
622
628
1
6.158
6.158
0.84
0.84
Pro only
C L M
M00253
52.63
616
623
622
629
1
2.716
4.208
0.81
0.87
cap 
C L M
MA0032
50.00
618
625
624
631
1
4.560
5.560
0.84
0.89
FREAC-3
C L M
M00087
57.14
633
644
636
647
2
9.009
6.070
0.90
0.80
Ik-2 
C M
M01003*
58.54
634
644
637
647
2
7.152
8.071
0.84
0.87
Pro only
C L M
MA0098
55.56
635
640
638
643
1
4.122
3.718
0.83
0.81
c-ETS
C L M
M00986*
55.56
636
641
639
644
2
5.392
3.573
0.88
0.80
Pro only
C L M
M00962*
61.54
641
649
644
652
1
7.767
7.070
0.92
0.90
Pro only
C L M
MA0087
64.86
642
648
645
651
1
6.367
9.767
0.83
0.96
Sox-5
C L M
M00253
63.16
644
651
647
654
1
4.426
3.062
0.88
0.82
cap 
C L M
M00734*
66.67
646
654
649
657
2
6.085
6.085
0.82
0.82
Pro only
C L M
M01022*
67.50
648
657
651
660
2
7.319
10.560
0.84
0.94
Pro only
C L M
M00671*
68.42
649
656
652
659
1
7.053
7.925
0.85
0.88
Pro only
C L M
M00978*
68.29
649
659
652
662
1
8.432
9.028
0.85
0.86
Pro only
C L M
M00805*
69.44
650
655
653
658
2
5.940
9.662
0.84
1.00
Pro only
C L M
M00253
68.42
651
658
654
661
2
3.587
3.587
0.84
0.84
cap 
C L M
M00101
67.57
651
657
654
660
1
4.059
4.059
0.86
0.86
CdxA 
C L M
M00100
67.57
651
657
654
660
1
4.006
4.006
0.80
0.80
CdxA 
C L M
M00462*
65.00
651
660
654
663
1
5.142
5.199
0.83
0.83
Pro only
C L M
MA0037
69.44
653
658
656
661
1
4.118
4.118
0.82
0.82
GATA-3
C L M
MA0035
69.44
653
658
656
661
1
5.106
5.106
0.89
0.89
GATA-1
C L M
MA0036
68.57
653
657
656
660
1
5.105
5.105
0.91
0.91
GATA-2
C L M
M00789*
67.57
653
659
656
662
1
4.401
4.973
0.80
0.82
Pro only
C L M
MA0089
66.67
654
659
657
662
1
8.692
4.456
0.99
0.81
TCF11-MafG
C L M
M00744*
60.00
655
664
658
667
1
6.712
8.861
0.80
0.86
Pro only
C L M
M00253
50.00
671
678
679
686
2
4.430
3.732
0.88
0.85
cap 
C only
M00684*
55.00
678
687
686
695
1
8.023
6.475
0.89
0.83
Pro only
C L M
M00792*
61.54
746
754
751
759
1
4.967
7.383
0.82
0.93
Pro only
C L M
M00253
55.26
755
762
760
767
2
4.280
4.330
0.87
0.87
cap 
C L M
M00253
50.00
769
776
769
776
2
5.783
5.751
0.93
0.93
cap 
C B
MA0067
50.00
771
778
771
778
2
5.976
6.992
0.88
0.92
Pax-2
C B
M00313*
50.00
771
778
771
778
2
4.339
5.523
0.80
0.86
Pro only
C B
M00253
68.42
783
790
783
790
2
4.208
4.503
0.87
0.88
cap 
C L M B
M00378
66.67
784
795
784
795
2
7.455
5.833
0.87
0.81
Pax-4 
C L M B
M00253
68.42
785
792
785
792
2
5.835
4.626
0.94
0.89
cap 
C L M B
M00792*
69.23
786
794
786
794
2
5.111
5.111
0.83
0.83
Pro only
C L M B
M00253
65.79
789
796
789
796
2
4.803
4.816
0.89
0.89
cap 
C L M B
M01003*
58.54
794
804
794
804
1
9.971
6.295
0.93
0.81
Pro only
C L B
M00986*
61.11
797
802
797
802
1
3.573
4.880
0.80
0.86
Pro only
C L B
MA0075
54.29
847
851
844
848
2
4.766
9.124
0.82
1.00
S8
C L M
M00498*
52.63
847
854
844
851
1
6.097
5.233
0.90
0.87
Pro only
C L M
M00493*
52.63
847
854
844
851
1
4.796
5.599
0.82
0.86
Pro only
C L M
M00494*
52.63
847
854
844
851
1
5.462
6.010
0.84
0.87
Pro only
C L M
M00148
54.05
866
872
859
865
2
4.848
5.369
0.83
0.85
SRY 
C only
M00699*
50.00
867
878
860
871
2
9.661
10.989
0.82
0.85
Pro only
C L M
M00624*
51.35
868
874
861
867
1
4.638
4.638
0.82
0.82
Pro only
C L M
M00630*
51.28
868
876
861
869
1
5.260
7.454
0.81
0.89
Pro only
C L M
MA0050
50.00
868
879
861
872
2
9.318
10.277
0.82
0.84
Irf-1
C L M
M00314*
52.63
870
877
863
870
1
6.193
6.669
0.89
0.91
Pro only
C L M
M00313*
52.63
870
877
863
870
1
6.601
7.075
0.91
0.94
Pro only
C L M
M00315*
52.63
870
877
863
870
1
6.309
6.968
0.90
0.93
Pro only
C L M
M00747*
54.05
871
877
864
870
1
7.666
10.025
0.88
0.97
Pro only
C L M
M00253
52.63
872
879
865
872
1
4.621
6.609
0.89
0.97
cap 
C L M
M00486*
56.41
873
881
866
874
2
4.990
6.843
0.84
0.92
Pro only
C L M
M00394
56.41
873
881
866
874
2
6.591
5.237
0.87
0.80
Msx-1 
C L M
M00496*
57.89
874
881
867
874
1
6.286
4.494
0.90
0.82
Pro only
C L M
M00494*
57.89
874
881
867
874
1
5.911
5.037
0.86
0.83
Pro only
C L M
MA0081
64.86
877
883
870
876
2
5.133
5.133
0.82
0.82
SPI-B
C L M
M00644*
64.86
879
885
872
878
1
5.546
8.216
0.80
0.93
Pro only
C L M
M00189
59.52
955
966
956
967
2
6.368
7.546
0.80
0.83
AP-2 
C L M
M00255
59.09
959
972
960
973
1
11.081
10.571
0.89
0.88
GC box 
C L M
M00196
58.14
959
971
960
972
1
13.674
13.945
0.93
0.93
Sp1 
C L M
M00932*
58.14
959
971
960
972
1
14.004
13.790
0.94
0.93
Pro only
C L M
M00933*
60.00
960
969
961
970
2
13.515
13.839
0.96
0.97
Pro only
C L M
M00938*
65.22
961
976
962
977
1
9.613
8.479
0.83
0.80
Pro only
C L M
M00649*
60.53
961
968
962
969
1
8.309
10.557
0.86
0.94
Pro only
C L M
M00931*
60.00
961
970
962
971
1
13.919
15.477
0.96
1.00
Pro only
C L M
MA0079
60.00
961
970
962
971
1
7.800
8.598
0.86
0.89
SP1
C L M
M00008
60.00
961
970
962
971
1
9.499
10.770
0.91
0.96
Sp1 
C L M
M00695*
59.46
961
967
962
968
1
7.466
9.502
0.91
0.99
Pro only
C L M
M00986*
58.33
961
966
962
967
1
4.722
4.722
0.85
0.85
Pro only
C L M
M00716*
63.16
962
969
963
970
1
7.102
7.102
0.88
0.88
Pro only
C L M
M00470*
61.54
962
970
963
971
2
5.000
5.000
0.80
0.80
Pro only
C L M
M00469*
61.54
962
970
963
971
2
5.927
5.927
0.85
0.85
Pro only
C L M
MA0003
61.54
962
970
963
971
2
5.927
5.927
0.85
0.85
AP2alpha
C L M
M00940*
65.00
963
972
964
973
2
7.155
7.155
0.83
0.83
Pro only
C L M
M00803*
63.89
963
968
964
969
1
8.243
8.243
0.97
0.97
Pro only
C L M
M00083
63.16
963
970
964
971
1
6.039
6.039
0.81
0.81
MZF1 
C L M
M00428*
65.79
964
971
965
972
2
4.134
4.134
0.81
0.81
Pro only
C L M
M00986*
66.67
965
970
966
971
1
7.013
7.013
0.96
0.96
Pro only
C L M
MA0105
70.73
966
976
967
977
2
9.887
9.727
0.84
0.84
p50
C L M
M00428*
68.42
966
973
967
974
2
6.179
5.582
0.89
0.87
Pro only
C L M
M00986*
66.67
966
971
967
972
1
4.346
4.346
0.84
0.84
Pro only
C L M
M00497*
71.05
967
974
968
975
2
3.997
4.862
0.81
0.85
Pro only
C L M
M00253
73.68
969
976
970
977
1
4.889
4.969
0.90
0.90
cap 
C L M
M00652*
65.00
979
988
980
989
2
15.042
11.416
1.00
0.89
Pro only
C L M
M00322*
65.00
979
988
980
989
2
7.659
7.171
0.86
0.84
Pro only
C L M
M00652*
60.00
981
990
982
991
1
15.042
11.508
1.00
0.90
Pro only
C L M
M00322*
60.00
981
990
982
991
1
7.659
8.241
0.86
0.87
Pro only
C L M
MA0006
61.11
983
988
984
989
2
4.891
9.197
0.80
0.98
Ahr-ARNT
C L M
M00726*
61.11
983
988
984
989
1
6.502
7.666
0.91
0.98
Pro only
C L M
M00927*
51.28
988
996
989
997
2
5.974
6.414
0.81
0.83
Pro only
C L M
M00253
50.00
988
995
989
996
1
4.895
4.496
0.90
0.88
cap 
C L M
MA0028
50.00
998
1007
1002
1011
1
9.853
11.535
0.94
1.00
Elk-1
C L M
MA0081
54.05
1000
1006
1004
1010
1
4.742
8.968
0.80
0.95
SPI-B
C L M
M00428*
52.63
1000
1007
1004
1011
2
5.934
4.300
0.88
0.82
Pro only
C L M
MA0076
51.28
1000
1008
1004
1012
1
8.852
13.521
0.84
0.97
SAP-1
C L M
M00743*
52.63
1001
1008
1005
1012
1
7.467
11.090
0.85
0.99
Pro only
C L M
M00971*
52.63
1001
1008
1005
1012
2
7.139
8.639
0.86
0.91
Pro only
C L M
MA0080
55.56
1002
1007
1006
1011
1
5.834
8.711
0.88
1.00
SPI-1
C L M
MA0098
55.56
1002
1007
1006
1011
2
7.797
7.797
1.00
1.00
c-ETS
C L M

LAGAN

LAGAN ALIGNMENT

                  10        20        30        40        50        60        70        80        90       100
seq1      aatggcttgaaatagtggctactatggttgcaccataggaaaagtggggacaggtgacaagtgAGACTCAGTCCTCAGGGTGGAGACAGtcagggtagga
          || ||  || |                               ||  ||   |   | | || |||| |||||| |||| | |||||              
seq2      aaaggagtggag------------------------------agaaggagaatcagtctagggAGAATCAGTCTTCAGAGAGGAGATTA-----------
                  10                                      20        30        40        50                    

                 110       120       130       140       150       160       170       180       190          
seq1      gggctggggataaggggtagctggcgtgtgtgtgtatgtactggcatcggggtggggtgagagggtgcagaggGAGGATAACCAgggataag--------
                                                                                   ||||||||||| |  ||||        
seq2      -------------------------------------------------------------------------GAGGATAACCAagactaagttaaactt
                                                                                  60        70        80      

                     200       210       220       230          240       250       260       270       280   
seq1      ------aaaagaaactacCAAGATTTTGGGTGTCCAGGAGCCTgc---ctgaggcctgctgAATATCTCCTATCCCTTCTTCTGTGGCCTTtatccctcc
                |||    ||    |||||||||| ||  |||||||||||   ||||   |   |  | | ||| |  ||| ||| | ||| |  | || ||  |
seq2      agtcaaaaactctacactTAAGATTTTGGATGCTCAGGAGCCTgcatcctgaaaacccttaCACACCTCTTTCCCCCTCTCCAGTGACTCTcattccctc
            90       100       110       120       130       140       150       160       170       180      

              290       300       310       320       330       340       350             360       370       
seq1      tcattttgcaccttcaattgctccccagtcacttctTCTCATCCATCTCTTTCACTCACTCCTGTTCTC------ccatcccattaagtACTCTGTAcac
           || |  ||                           |   || |||| || |||| | | |||||||||      ||   ||   ||| | || ||| ||
seq2      acactgagc--------------------------cTTCTATTCATCCCTGTCACCCCCACCTGTTCTCaccacccccctcccccaagcATTCCGTAaac
           190                                 200       210       220       230       240       250       260

          380       390       400       410       420       430       440       450       460       470       
seq1      ctaggaggcttgtgaaacagcttAAATGCAATTAAGATAACCAGAgtgtatcctcagccctaaaaaagttacagtctaaGCTTTCTTCAAGgaaggctgT
          |    || |  ||| |||| || || |  ||| |||||||||   ||||                 ||| ||     ||| || |||||||  |||   |
seq2      ccgctagacgcgtgcaacaact-AAGTATAATCAAGATAACCTATgtgtc----------------agtgacgtcggaaGTTTCCTTCAAGagaggtccT
                 270       280        290       300                       310       320       330       340   

          480       490       500       510       520       530       540       550                 560       
seq1      ATCAACTGAAGAGaagtagATGCCTGCCTGCAGTTTAAGAAATAGGGGCCAGTGAGTTGGTGttaactcaggacat----------tgggagggacagta
           |||||| || |    |||  ||  || |||| || |||| ||  | | ||| |||||| |  ||   || | | |          |  | | ||    |
seq2      TTCAACTAAACAT---tagGGGCTAGCTTGCACTTCAAGAGATGTGAGTCAGAGAGTTGATActagtccaaggcctatgggaaaggtaagggagattcca
              350          360       370       380       390       400       410       420       430       440

          570       580                                                       590       600                   
seq1      tttaggaccaggga------------------------------------------------tcaatgcctgaaggtttcCCAAAGTG------------
          |  || | || ||                                                 |  | ||| |   | |   |||||||            
seq2      tcaagaatcaaggccaaagccgggcggtggtggcacatgcctttaatccctgatttctgagtttgaggccagcctggtctACAAAGTGagttccaagaca
                 450       460       470       480       490       500       510       520       530       540

                                                                                   610       620       630    
seq1      -------------------------------------------------------------------------tggaCGAGACAACCTGTAaaactttgG
                                                                                   ||   |||||| |||||||||     |
seq2      gccagggctacacagaaaaatcctgtctcgaaaaaccaaaaaaaaaaaaaaagaagattcaaggccgaaatcttgtgGGAGACACCCTGTAaaagc---G
                 550       560       570       580       590       600       610       620       630          

             640       650       660       670            680       690       700       710       720       73
seq1      ATTCCCTGAGCAATCTTTTGATGACTAACTccagtgcgga-----gtgTCAGGAGAGCgggcaatccgtcttcagtggttttggtcagcaggccacaaac
          | ||||||| ||||  ||||||||  ||  |  ||  ||      ||||| || |||  ||| | |  ||| || |   ||| |    || |  |  |  
seq2      AATCCCTGAACAATTCTTTGATGAACAAAAcatgtcagggtgctggtgTCTGGGGAGGaggccacctctctccaataactttagctgacatgttatgat-
          640       650       660       670       680       690       700       710       720       730       

          0       740       750       760       770       780       790       800       810       820       83
seq1      agggttgactattcccAGACGGGTCGTGAGTGGtacaagatgagtgatccctcCAGGGTGTGACTGTAGGGATGAgctcgccctcagtcccagacgtcgc
            || |    |  || |||| || ||||  ||| |||||     ||| |  || || ||||| ||| ||||| || | |     ||   ||||     | 
seq2      --gggtccacaacccaAGACAGGCCGTGGCTGGcacaag-----tgaccgttcTAGAGTGTGGCTGCAGGGACGAacgcattgccaa--ccaggtactgt
             740       750       760       770            780       790       800       810         820       

          0       840       850       860       870       880       890       900              910       920  
seq1      gactgttggcagtggatCAATTCACaacagcctggcgTAGCTTCAATTTCGGCTCCggaatcgccctttgctgtg-------tcatagacctgaggctgg
          || | |  | |  ||   ||||| ||| |||||    |||||||| |||| ||| |    | |  ||||| |          |  | ||  || | || |
seq2      ga-tctcagtaacgggcTAATTCGCaatagcct----TAGCTTCAGTTTCAGCTTCatgcttggactttgataaaaggtccttatttgaggtgtgacttg
           830       840       850           860       870       880       890       900       910       920  

               930       940        950       960       970       980       990         1000      1010      10
seq1      actggaccgctaggcgcaggactgcag-ggccgGCCGGGTGGGCGGGGCACACCCagTGCGCATGCGCAGCACCCc---GGCCCGGAAACagcgcggggt
                ||| |    ||| |   || | |  |   |||  ||||||||||| | | | ||||| ||||||   |||   |  |||||| ||||   ||||
seq2      ggcaagccgatcaaagcaaggaagctgtgagcaAGCGGCGGGGCGGGGCACCCGCggGGCGCACGCGCAGATGCCcttaGAACCGGAAGCagccttgggt
               930       940       950       960       970       980       990      1000      1010      1020  

          20   
seq1      ccgct
          | |  
seq2      cgggc
               

LAGAN ALIGNED HITS

Matrix
Identity
Seq1 from
Seq1 to
Seq2 from
Seq2 to
Strand
Score1
Score2
Rel.Score1
Rel.Score2
Factor
Found by:
C = CONREAL
L = LAGAN
M = MAVID
B = BLASTZ
M00630*
64.10
64
72
34
42
1
5.617
7.097
0.82
0.88
Pro only
L C M
M00313*
65.79
66
73
36
43
1
6.105
4.414
0.89
0.81
Pro only
L C M
M00314*
65.79
66
73
36
43
1
6.299
4.600
0.89
0.81
Pro only
L C M
M00315*
65.79
66
73
36
43
1
6.570
4.758
0.91
0.83
Pro only
L C M
M00253
63.16
68
75
38
45
1
7.135
7.359
0.99
1.00
cap 
L C M
M00314*
63.16
73
80
43
50
1
4.371
4.347
0.80
0.80
Pro only
L C M
M00801*
66.67
73
78
43
48
1
4.873
4.873
0.82
0.82
Pro only
L C M
M00083
57.89
77
84
47
54
1
6.967
6.396
0.85
0.82
MZF1 
L C M
M00935*
57.50
80
89
50
59
1
6.821
6.117
0.83
0.80
Pro only
L C
M00075
50.00
174
183
60
69
1
4.711
4.711
0.82
0.82
GATA-1 
L M
M00076
50.00
174
183
60
69
1
7.048
7.048
0.91
0.91
GATA-2 
L M
M00346
50.00
174
183
60
69
1
7.621
7.621
0.83
0.83
GATA-1 
L M
M00462*
50.00
174
183
60
69
1
6.759
6.759
0.89
0.89
Pro only
L M
M00971*
52.63
174
181
60
67
2
5.641
5.641
0.81
0.81
Pro only
L M
M00655*
54.05
175
181
61
67
2
5.359
5.359
0.81
0.81
Pro only
L C M
MA0098
52.78
175
180
61
66
2
7.229
7.229
0.97
0.97
c-ETS
L C M
M00396
54.05
176
182
62
68
2
4.063
4.063
0.83
0.83
En-1 
L C M
M00789*
54.05
176
182
62
68
1
6.466
6.466
0.87
0.87
Pro only
L C M
MA0035
55.56
176
181
62
67
1
4.642
4.642
0.87
0.87
GATA-1
L C M
MA0036
54.29
176
180
62
66
1
6.651
6.651
1.00
1.00
GATA-2
L C M
MA0037
55.56
176
181
62
67
1
5.017
5.017
0.86
0.86
GATA-3
L C M
MA0089
55.56
177
182
63
68
1
4.925
4.925
0.83
0.83
TCF11-MafG
L C M
M00101
54.05
178
184
64
70
1
3.818
3.818
0.85
0.85
CdxA 
L C M
M00076
67.50
205
214
105
114
1
4.948
4.682
0.83
0.82
GATA-2 
L C
M00462*
67.50
205
214
105
114
1
5.811
5.532
0.86
0.84
Pro only
L C
M00077
69.23
206
214
106
114
1
6.417
6.417
0.85
0.85
GATA-3 
L C M
M00101
67.57
206
212
106
112
2
3.208
3.208
0.83
0.83
CdxA 
L C M
M00734*
69.23
206
214
106
114
2
5.566
5.566
0.80
0.80
Pro only
L C M
MA0035
66.67
207
212
107
112
1
4.474
4.474
0.86
0.86
GATA-1
L C M
MA0036
65.71
207
211
107
111
1
4.454
4.454
0.87
0.87
GATA-2
L C M
MA0037
66.67
207
212
107
112
1
5.457
5.457
0.88
0.88
GATA-3
L C M
M00396
70.27
209
215
109
115
1
3.739
3.739
0.81
0.81
En-1 
L C M
M00690*
71.05
209
216
109
116
2
5.331
6.363
0.83
0.87
Pro only
L C M
M00253
68.42
212
219
112
119
2
2.977
3.419
0.82
0.84
cap 
L C M
M00450*
66.67
213
221
113
121
1
7.793
6.580
0.86
0.81
Pro only
L C M
M00726*
69.44
221
226
121
126
1
5.105
5.105
0.84
0.84
Pro only
L C M
M00963*
66.67
221
229
121
129
2
5.535
5.535
0.82
0.82
Pro only
L C M
MA0103
69.44
221
226
121
126
2
5.333
5.333
0.84
0.84
deltaEF1
L C M
MA0109
55.26
245
252
148
155
1
8.287
4.685
0.96
0.81
RUSH1-alfa
L C M
MA0039
52.50
252
261
155
164
2
7.473
7.901
0.88
0.89
Gklf
L C M
M00986*
52.78
255
260
158
163
2
3.573
6.042
0.80
0.91
Pro only
L C M
MA0039
57.50
257
266
160
169
2
8.934
5.667
0.92
0.82
Gklf
L C M
M00964*
59.52
263
274
166
177
2
5.578
8.918
0.81
0.90
Pro only
L C M
M00744*
55.00
320
329
197
206
2
6.748
9.329
0.80
0.87
Pro only
L C
M00106
57.50
323
332
200
209
1
8.408
7.217
0.89
0.86
CDP CR3+HD 
L C
M00253
57.89
326
333
203
210
1
4.063
6.177
0.86
0.95
cap 
L C
MA0035
55.56
326
331
203
208
2
6.922
5.498
0.99
0.91
GATA-1
L C
M00704*
58.33
327
332
204
209
2
7.479
7.955
0.95
0.97
Pro only
L C M
MA0036
57.14
327
331
204
208
2
5.559
5.978
0.94
0.96
GATA-2
L C M
MA0067
68.42
333
340
210
217
1
5.370
5.060
0.85
0.84
Pax-2
L C M
M00253
68.42
335
342
212
219
1
5.713
6.123
0.93
0.95
cap 
L C M
M00413
64.29
339
350
216
227
1
8.302
10.003
0.83
0.88
AREB6 
L C M
M00963*
69.23
339
347
216
224
1
5.009
6.082
0.80
0.84
Pro only
L C M
M00712*
65.79
342
349
219
226
2
5.846
9.546
0.81
0.95
Pro only
L C M
M00726*
69.44
342
347
219
224
2
5.105
7.666
0.84
0.98
Pro only
L C M
M00973*
65.79
342
349
219
226
1
6.262
10.567
0.82
0.97
Pro only
L C M
M01008*
64.10
342
350
219
227
1
5.945
9.762
0.82
0.93
Pro only
L C M
MA0103
69.44
342
347
219
224
1
5.333
9.262
0.84
1.00
deltaEF1
L C M
M00962*
61.54
343
351
220
228
2
7.260
7.260
0.90
0.90
Pro only
L C M
M00921*
60.53
344
351
221
228
1
9.012
9.012
0.96
0.96
Pro only
L C M
M00963*
58.97
344
352
221
229
1
5.724
5.724
0.83
0.83
Pro only
L C M
M00496*
57.89
345
352
222
229
1
4.623
4.623
0.83
0.83
Pro only
L C M
M00497*
57.89
345
352
222
229
1
4.994
4.994
0.86
0.86
Pro only
L C M
M00499*
57.89
345
352
222
229
1
6.810
6.810
0.94
0.94
Pro only
L C M
MA0109
57.89
345
352
222
229
1
4.489
4.489
0.80
0.80
RUSH1-alfa
L C M
MA0080
58.33
347
352
224
229
2
4.644
4.644
0.83
0.83
SPI-1
L C M
MA0032
55.26
367
374
250
257
1
5.823
4.916
0.91
0.86
FREAC-3
L C M
M00724*
51.22
401
411
283
293
2
6.773
5.872
0.83
0.81
Pro only
L C M
M00096
53.85
404
412
286
294
1
5.997
7.871
0.81
0.87
Pbx-1 
L C M
M00241
55.26
406
413
288
295
2
11.098
6.593
1.00
0.82
Nkx2-5 
L C M
M00318*
55.26
406
413
288
295
1
8.578
7.967
0.87
0.85
Pro only
L C M
MA0075
57.14
406
410
288
292
2
4.766
5.937
0.82
0.87
S8
L C M
M00079
51.22
407
417
289
299
1
8.873
8.873
0.80
0.80
Evi-1 
L C M
M00128
53.49
409
421
291
303
1
9.213
6.577
0.89
0.82
GATA-1 
L C M
MA0033
55.26
409
416
291
298
1
6.104
5.446
0.88
0.85
FREAC-7
L C M
MA0063
56.76
409
415
291
297
1
6.024
4.544
0.87
0.81
Nkx
L C M
M00076
52.50
410
419
292
301
1
6.209
6.475
0.88
0.89
GATA-2 
L C M
M00346
52.50
410
419
292
301
1
8.800
9.441
0.87
0.89
GATA-1 
L C M
M00347
52.50
410
419
292
301
1
6.927
8.751
0.81
0.86
GATA-1 
L C M
M00348
52.50
410
419
292
301
1
8.239
8.484
0.85
0.86
GATA-2 
L C M
M00350
52.50
410
419
292
301
1
7.110
7.289
0.81
0.81
GATA-3 
L C M
M00462*
52.50
410
419
292
301
1
7.955
8.234
0.94
0.95
Pro only
L C M
M00077
53.85
411
419
293
301
1
5.913
5.913
0.83
0.83
GATA-3 
L C M
M00278
53.85
411
419
293
301
1
8.372
8.372
0.90
0.90
Lmo2 complex 
L C M
M00747*
54.05
411
417
293
299
2
5.565
5.565
0.80
0.80
Pro only
L C M
MA0109
52.63
411
418
293
300
2
5.284
5.284
0.83
0.83
RUSH1-alfa
L C M
M00203
53.66
412
422
294
304
1
6.088
6.607
0.80
0.82
GATA-X 
L C M
M00396
54.05
412
418
294
300
2
4.063
4.063
0.83
0.83
En-1 
L C M
M00789*
54.05
412
418
294
300
1
8.781
8.781
0.95
0.95
Pro only
L C M
MA0035
55.56
412
417
294
299
1
4.460
4.460
0.86
0.86
GATA-1
L C M
MA0036
57.14
412
416
294
298
1
6.232
6.232
0.98
0.98
GATA-2
L C M
MA0037
55.56
412
417
294
299
1
7.189
7.189
0.95
0.95
GATA-3
L C M
MA0089
55.56
413
418
295
300
1
4.925
4.925
0.83
0.83
TCF11-MafG
L C M
MA0039
60.00
457
466
323
332
2
6.149
5.099
0.84
0.81
Gklf
L C M
MA0080
58.33
458
463
324
329
2
4.721
5.308
0.83
0.86
SPI-1
L C M
M00498*
63.16
460
467
326
333
1
3.804
3.804
0.81
0.81
Pro only
L C M
M00100
62.16
462
468
328
334
2
4.080
4.080
0.81
0.81
CdxA 
L C M
M00073
63.41
477
487
343
353
1
6.894
6.945
0.83
0.83
deltaEF1 
L C M
M00773*
58.54
480
490
346
356
2
6.848
5.783
0.85
0.81
Pro only
L C
M00913*
58.97
480
488
346
354
1
7.327
5.894
0.91
0.85
Pro only
L C
M00747*
59.46
481
487
347
353
2
10.025
5.982
0.97
0.82
Pro only
L C M
M00272
55.00
497
506
360
369
1
6.633
7.412
0.85
0.87
p53 
L C M
M00747*
62.16
506
512
369
375
1
6.075
6.927
0.82
0.85
Pro only
L C M
M00253
65.79
507
514
370
377
1
4.778
4.058
0.89
0.86
cap 
L C M
MA0063
64.86
512
518
375
381
1
5.612
6.122
0.85
0.87
Nkx
L C M
M00077
66.67
516
524
379
387
1
5.402
5.917
0.81
0.83
GATA-3 
L C M
M00966*
62.75
519
539
382
402
2
10.363
10.510
0.81
0.82
Pro only
L C M
M00964*
64.29
522
533
385
396
1
6.489
6.606
0.84
0.84
Pro only
L C M
M00444*
62.22
523
537
386
400
1
7.678
11.326
0.81
0.90
Pro only
L C M
M00253
63.16
526
533
389
396
1
2.761
3.460
0.81
0.84
cap 
L C M
M00773*
63.41
526
536
389
399
1
7.078
6.864
0.86
0.86
Pro only
L C M
MA0038
62.50
527
536
390
399
2
7.669
6.521
0.85
0.82
Gfi
L C M
M00913*
61.54
528
536
391
399
2
6.145
6.145
0.86
0.86
Pro only
L C M
M00183
62.50
529
538
392
401
2
5.469
6.288
0.81
0.84
c-Myb 
L C M
M00805*
50.00
600
605
521
526
1
6.066
8.180
0.84
0.94
Pro only
L C
MA0103
50.00
602
607
523
528
2
4.459
4.459
0.81
0.81
deltaEF1
L C
MA0027
53.66
612
622
618
628
2
4.646
4.914
0.81
0.82
EN-1
L C M
MA0109
57.89
613
620
619
626
2
5.458
5.123
0.84
0.83
RUSH1-alfa
L C M
M00792*
56.41
614
622
620
628
1
6.153
8.913
0.87
1.00
Pro only
L C M
M00032
52.50
615
624
621
630
2
6.551
6.551
0.82
0.82
c-Ets-1(p54) 
L C M
M00253
52.63
616
623
622
629
1
2.716
4.208
0.81
0.87
cap 
L C M
M00655*
54.05
616
622
622
628
1
6.158
6.158
0.84
0.84
Pro only
L C M
MA0032
50.00
618
625
624
631
1
4.560
5.560
0.84
0.89
FREAC-3
L C M
M01003*
58.54
634
644
637
647
2
7.152
8.071
0.84
0.87
Pro only
L C M
MA0098
55.56
635
640
638
643
1
4.122
3.718
0.83
0.81
c-ETS
L C M
M00986*
55.56
636
641
639
644
2
5.392
3.573
0.88
0.80
Pro only
L C M
M00962*
61.54
641
649
644
652
1
7.767
7.070
0.92
0.90
Pro only
L C M
MA0087
64.86
642
648
645
651
1
6.367
9.767
0.83
0.96
Sox-5
L C M
M00253
63.16
644
651
647
654
1
4.426
3.062
0.88
0.82
cap 
L C M
M00734*
66.67
646
654
649
657
2
6.085
6.085
0.82
0.82
Pro only
L C M
M01022*
67.50
648
657
651
660
2
7.319
10.560
0.84
0.94
Pro only
L C M
M00671*
68.42
649
656
652
659
1
7.053
7.925
0.85
0.88
Pro only
L C M
M00978*
68.29
649
659
652
662
1
8.432
9.028
0.85
0.86
Pro only
L C M
M00805*
69.44
650
655
653
658
2
5.940
9.662
0.84
1.00
Pro only
L C M
M00100
67.57
651
657
654
660
1
4.006
4.006
0.80
0.80
CdxA 
L C M
M00101
67.57
651
657
654
660
1
4.059
4.059
0.86
0.86
CdxA 
L C M
M00253
68.42
651
658
654
661
2
3.587
3.587
0.84
0.84
cap 
L C M
M00462*
65.00
651
660
654
663
1
5.142
5.199
0.83
0.83
Pro only
L C M
M00789*
67.57
653
659
656
662
1
4.401
4.973
0.80
0.82
Pro only
L C M
MA0035
69.44
653
658
656
661
1
5.106
5.106
0.89
0.89
GATA-1
L C M
MA0036
68.57
653
657
656
660
1
5.105
5.105
0.91
0.91
GATA-2
L C M
MA0037
69.44
653
658
656
661
1
4.118
4.118
0.82
0.82
GATA-3
L C M
MA0089
66.67
654
659
657
662
1
8.692
4.456
0.99
0.81
TCF11-MafG
L C M
M00744*
60.00
655
664
658
667
1
6.712
8.861
0.80
0.86
Pro only
L C M
M00684*
55.00
678
687
686
695
1
8.023
6.475
0.89
0.83
Pro only
L C M
M00792*
61.54
746
754
751
759
1
4.967
7.383
0.82
0.93
Pro only
L C M
M00253
55.26
755
762
760
767
2
4.280
4.330
0.87
0.87
cap 
L C M
M00253
68.42
783
790
783
790
2
4.208
4.503
0.87
0.88
cap 
L C M B
M00378
66.67
784
795
784
795
2
7.455
5.833
0.87
0.81
Pax-4 
L C M B
M00253
68.42
785
792
785
792
2
5.835
4.626
0.94
0.89
cap 
L C M B
M00792*
69.23
786
794
786
794
2
5.111
5.111
0.83
0.83
Pro only
L C M B
M00253
65.79
789
796
789
796
2
4.803
4.816
0.89
0.89
cap 
L C M B
M01003*
58.54
794
804
794
804
1
9.971
6.295
0.93
0.81
Pro only
L C B
M00986*
61.11
797
802
797
802
1
3.573
4.880
0.80
0.86
Pro only
L C B
M00493*
52.63
847
854
844
851
1
4.796
5.599
0.82
0.86
Pro only
L C M
M00494*
52.63
847
854
844
851
1
5.462
6.010
0.84
0.87
Pro only
L C M
M00498*
52.63
847
854
844
851
1
6.097
5.233
0.90
0.87
Pro only
L C M
MA0075
54.29
847
851
844
848
2
4.766
9.124
0.82
1.00
S8
L C M
M00699*
50.00
867
878
860
871
2
9.661
10.989
0.82
0.85
Pro only
L C M
M00624*
51.35
868
874
861
867
1
4.638
4.638
0.82
0.82
Pro only
L C M
M00630*
51.28
868
876
861
869
1
5.260
7.454
0.81
0.89
Pro only
L C M
MA0050
50.00
868
879
861
872
2
9.318
10.277
0.82
0.84
Irf-1
L C M
M00313*
52.63
870
877
863
870
1
6.601
7.075
0.91
0.94
Pro only
L C M
M00314*
52.63
870
877
863
870
1
6.193
6.669
0.89
0.91
Pro only
L C M
M00315*
52.63
870
877
863
870
1
6.309
6.968
0.90
0.93
Pro only
L C M
M00747*
54.05
871
877
864
870
1
7.666
10.025
0.88
0.97
Pro only
L C M
M00253
52.63
872
879
865
872
1
4.621
6.609
0.89
0.97
cap 
L C M
M00394
56.41
873
881
866
874
2
6.591
5.237
0.87
0.80
Msx-1 
L C M
M00486*
56.41
873
881
866
874
2
4.990
6.843
0.84
0.92
Pro only
L C M
M00494*
57.89
874
881
867
874
1
5.911
5.037
0.86
0.83
Pro only
L C M
M00496*
57.89
874
881
867
874
1
6.286
4.494
0.90
0.82
Pro only
L C M
MA0081
64.86
877
883
870
876
2
5.133
5.133
0.82
0.82
SPI-B
L C M
M00644*
64.86
879
885
872
878
1
5.546
8.216
0.80
0.93
Pro only
L C M
M00189
59.52
955
966
956
967
2
6.368
7.546
0.80
0.83
AP-2 
L C M
M00196
58.14
959
971
960
972
1
13.674
13.945
0.93
0.93
Sp1 
L C M
M00255
59.09
959
972
960
973
1
11.081
10.571
0.89
0.88
GC box 
L C M
M00932*
58.14
959
971
960
972
1
14.004
13.790
0.94
0.93
Pro only
L C M
M00933*
60.00
960
969
961
970
2
13.515
13.839
0.96
0.97
Pro only
L C M
M00008
60.00
961
970
962
971
1
9.499
10.770
0.91
0.96
Sp1 
L C M
M00649*
60.53
961
968
962
969
1
8.309
10.557
0.86
0.94
Pro only
L C M
M00695*
59.46
961
967
962
968
1
7.466
9.502
0.91
0.99
Pro only
L C M
M00931*
60.00
961
970
962
971
1
13.919
15.477
0.96
1.00
Pro only
L C M
M00938*
65.22
961
976
962
977
1
9.613
8.479
0.83
0.80
Pro only
L C M
M00986*
58.33
961
966
962
967
1
4.722
4.722
0.85
0.85
Pro only
L C M
MA0079
60.00
961
970
962
971
1
7.800
8.598
0.86
0.89
SP1
L C M
M00469*
61.54
962
970
963
971
2
5.927
5.927
0.85
0.85
Pro only
L C M
M00470*
61.54
962
970
963
971
2
5.000
5.000
0.80
0.80
Pro only
L C M
M00716*
63.16
962
969
963
970
1
7.102
7.102
0.88
0.88
Pro only
L C M
MA0003
61.54
962
970
963
971
2
5.927
5.927
0.85
0.85
AP2alpha
L C M
M00083
63.16
963
970
964
971
1
6.039
6.039
0.81
0.81
MZF1 
L C M
M00803*
63.89
963
968
964
969
1
8.243
8.243
0.97
0.97
Pro only
L C M
M00940*
65.00
963
972
964
973
2
7.155
7.155
0.83
0.83
Pro only
L C M
M00428*
65.79
964
971
965
972
2
4.134
4.134
0.81
0.81
Pro only
L C M
M00986*
66.67
965
970
966
971
1
7.013
7.013
0.96
0.96
Pro only
L C M
M00428*
68.42
966
973
967
974
2
6.179
5.582
0.89
0.87
Pro only
L C M
M00986*
66.67
966
971
967
972
1
4.346
4.346
0.84
0.84
Pro only
L C M
MA0105
70.73
966
976
967
977
2
9.887
9.727
0.84
0.84
p50
L C M
M00497*
71.05
967
974
968
975
2
3.997
4.862
0.81
0.85
Pro only
L C M
M00253
73.68
969
976
970
977
1
4.889
4.969
0.90
0.90
cap 
L C M
M00322*
65.00
979
988
980
989
2
7.659
7.171
0.86
0.84
Pro only
L C M
M00652*
65.00
979
988
980
989
2
15.042
11.416
1.00
0.89
Pro only
L C M
M00322*
60.00
981
990
982
991
1
7.659
8.241
0.86
0.87
Pro only
L C M
M00652*
60.00
981
990
982
991
1
15.042
11.508
1.00
0.90
Pro only
L C M
M00726*
61.11
983
988
984
989
1
6.502
7.666
0.91
0.98
Pro only
L C M
MA0006
61.11
983
988
984
989
2
4.891
9.197
0.80
0.98
Ahr-ARNT
L C M
M00253
50.00
988
995
989
996
1
4.895
4.496
0.90
0.88
cap 
L C M
M00927*
51.28
988
996
989
997
2
5.974
6.414
0.81
0.83
Pro only
L C M
MA0028
52.50
998
1007
1002
1011
1
9.853
11.535
0.94
1.00
Elk-1
L C M
M00428*
55.26
1000
1007
1004
1011
2
5.934
4.300
0.88
0.82
Pro only
L C M
MA0076
53.85
1000
1008
1004
1012
1
8.852
13.521
0.84
0.97
SAP-1
L C M
MA0081
56.76
1000
1006
1004
1010
1
4.742
8.968
0.80
0.95
SPI-B
L C M
M00743*
55.26
1001
1008
1005
1012
1
7.467
11.090
0.85
0.99
Pro only
L C M
M00971*
55.26
1001
1008
1005
1012
2
7.139
8.639
0.86
0.91
Pro only
L C M
MA0080
58.33
1002
1007
1006
1011
1
5.834
8.711
0.88
1.00
SPI-1
L C M
MA0098
58.33
1002
1007
1006
1011
2
7.797
7.797
1.00
1.00
c-ETS
L C M

MAVID

MAVID ALIGNMENT

                  10        20        30        40        50        60        70        80        90       100
seq1      aatggcttgaaatagtggctactatggttgcaccataggaaaagtggggacaggtgacaagtgAGACTCAGTCCTCAGGGTGGAgacagtcagggtagga
          || ||        |||||                      | ||  ||   |   | | || |||| |||||| |||| | |||||              
seq2      aaagg--------agtgg----------------------agagaaggagaatcagtctagggAGAATCAGTCTTCAGAGAGGAga--------------
                          10                              20        30        40        50                    

                 110       120       130       140       150       160       170       180       190          
seq1      gggctggggataaggggtagctggcgtgtgtgtgtatgtactggcatcggggtggggtgagagggtgcagagGGAGGATAACCAgggataaga-------
                                                                                   ||||||||||| |  ||||        
seq2      ----------------------------------------------------------------------ttAGAGGATAACCAagactaagttaaactt
                                                                                  60        70        80      

                  200          210       220       230          240       250       260       270       280   
seq1      ----aaagaaactacc---AAGATTTTGGGTGTCCAGGAGCCTgc---ctgaggcctgctgAATATCTCCTATCCCTTCTTCTGTGGCCTTtatccctcc
              ||| |  ||||    |||||||||| ||  |||||||||||   ||||   |   |  | | ||| |  ||| ||| | ||| |  | || |  ||
seq2      agtcaaaaactctacacttAAGATTTTGGATGCTCAGGAGCCTgcatcctgaaaacccttaCACACCTCTTTCCCCCTCTCCAGTGACTCTcattc--cc
            90       100       110       120       130       140       150       160       170       180      

              290       300       310       320       330       340       350        360            370       
seq1      TCATTTTGCACCTTCAATTgctccccagtcacttcttctcatcCATCTCTTTCACTCACTCCTGTTCTC-ccatcccatt-----aagtACTCTGTAcac
          |||   ||  ||||| |||                        |||| || |||| | | ||||||||| ||| |||  |     ||| | || ||| ||
seq2      TCACACTGAGCCTTCTATT------------------------CATCCCTGTCACCCCCACCTGTTCTCaccacccccctcccccaagcATTCCGTAaac
             190       200                               210       220       230       240       250       260

          380       390       400       410       420       430       440       450       460       470       
seq1      ctaggaggcttgtgaaacagcttAAATGCAATTAAGATAACCAGAgtgtatcctcagccctaaaaaagttacagtctaaGCTTTCTTCAAGgaaggctgT
          |    || |  ||| |||| | ||| |  ||| |||||||||   ||||                 ||| ||     ||| || |||||||  |||   |
seq2      ccgctagacgcgtgcaacaac-tAAGTATAATCAAGATAACCTATgtgt----------------cagtgacgtcggaaGTTTCCTTCAAGagaggtccT
                 270       280        290       300                       310       320       330       340   

          480       490       500       510       520       530       540       550          560       570    
seq1      ATCAACTGAAgagaagtagATGCCTGCCTGCAGTTTAAGAAATAGGGGCCAGTGAGTTGGTGttaactcaggacattggg---agggacagtatttagga
           |||||| ||    | |||  ||  || |||| || |||| ||  | | ||| |||||| |  ||   || | | |  ||   ||| |  | |  |   |
seq2      TTCAACTAAA---cattagGGGCTAGCTTGCACTTCAAGAGATGTGAGTCAGAGAGTTGATActagtccaaggcctatgggaaaggtaagggagattcca
              350          360       370       380       390       400       410       420       430       440

             580       590                                                                                    
seq1      ccagggatcaatgcct------------------------------------------------------------------------------------
           || | ||||| |||                                                                                     
seq2      tcaagaatcaaggccaaagccgggcggtggtggcacatgcctttaatccctgatttctgagtttgaggccagcctggtctacaaagtgagttccaagaca
                 450       460       470       480       490       500       510       520       530       540

                                                                         600       610       620       630    
seq1      ----------------------------------------------------gaaggttt----cccaaagtgtggaCGAGACAACCTGTAaaactttGG
                                                              |||| ||     || |||   ||   |||||| |||||||||     |
seq2      gccagggctacacagaaaaatcctgtctcgaaaaaccaaaaaaaaaaaaaaagaagattcaaggccgaaatcttgtgGGAGACACCCTGTAaaa---gCG
                 550       560       570       580       590       600       610       620       630          

             640       650       660       670            680       690       700       710       720       73
seq1      ATTCCCTGAGCAATCTTTTGATGACTAACTccagtgcgga-----gtgTCAGGAGAGCgggcaatccgtcttcagtggttttggtcagcaggccacaaac
          | ||||||| ||||  ||||||||  ||  |  ||  ||      ||||| || |||  ||| | |  ||| || |   ||| |    || |  |  |  
seq2      AATCCCTGAACAATTCTTTGATGAACAAAAcatgtcagggtgctggtgTCTGGGGAGGaggccacctctctccaataactttagctgacatgttatga--
          640       650       660       670       680       690       700       710       720       730       

          0       740       750       760       770       780       790       800       810       820       83
seq1      agggttgactattcccAGACGGGTCGTGAGTGGtacaagatgagtgatccctcCAGGGTGTGACTGTagggatgagctcgccctcagtcccagacgtcgc
           ||||  || |  || |||| || ||||  ||| |||     ||||| |  || || ||||| ||| |||||      ||  | || | |||  |     
seq2      tgggtccac-aacccaAGACAGGCCGTGGCTGGcaca-----agtgaccgttcTAGAGTGTGGCTGCaggga------cgaacgcattgccaaccaggta
            740        750       760       770            780       790       800             810       820   

          0       840          850       860       870       880       890       900          910       920   
seq1      gactgttggcagt---ggatCAATTCACaacagcctggcgTAGCTTCAATTTCGGCTCCggaatcgccctttgctgt---gtcatagacctgaggctgga
             || |  ||||   ||   ||||| ||| |||||    |||||||| |||| ||| |    | |  ||||| |     ||| |  |  |||||   ||
seq2      ctgtgatctcagtaacgggcTAATTCGCaatagcct----TAGCTTCAGTTTCAGCTTCatgcttggactttgataaaaggtcct-tatttgaggtgtga
              830       840       850           860       870       880       890       900        910       9

                   930       940       950        960       970       980       990         1000      1010    
seq1      ctgga-----ccgctaggcgcaggactgcagggc-cgGCCGGGTGGGCGGGGCACACCCagTGCGCATGCGCAGCACCCc---GGCCCGGAAACagcgcg
          || |      ||| |    ||| |   || | |  |   |||  ||||||||||| | | | ||||| ||||||   |||   |  |||||| ||||   
seq2      cttgggcaagccgatcaaagcaaggaagctgtgagcaAGCGGCGGGGCGGGGCACCCGCggGGCGCACGCGCAGATGCCcttaGAACCGGAAGCagcctt
          20       930       940       950       960       970       980       990      1000      1010      10

            1020   
seq1      gggtccgct
          ||||| |  
seq2      gggtcgggc
          20       

MAVID ALIGNED HITS

Matrix
Identity
Seq1 from
Seq1 to
Seq2 from
Seq2 to
Strand
Score1
Score2
Rel.Score1
Rel.Score2
Factor
Found by:
C = CONREAL
L = LAGAN
M = MAVID
B = BLASTZ
M00630*
64.10
64
72
34
42
1
5.617
7.097
0.82
0.88
Pro only
M C L
M00313*
65.79
66
73
36
43
1
6.105
4.414
0.89
0.81
Pro only
M C L
M00314*
65.79
66
73
36
43
1
6.299
4.600
0.89
0.81
Pro only
M C L
M00315*
65.79
66
73
36
43
1
6.570
4.758
0.91
0.83
Pro only
M C L
M00253
63.16
68
75
38
45
1
7.135
7.359
0.99
1.00
cap 
M C L
M00314*
63.16
73
80
43
50
1
4.371
4.347
0.80
0.80
Pro only
M C L
M00801*
66.67
73
78
43
48
1
4.873
4.873
0.82
0.82
Pro only
M C L
M00083
57.89
77
84
47
54
1
6.967
6.396
0.85
0.82
MZF1 
M C L
MA0056
52.78
173
178
59
64
1
5.636
5.322
0.84
0.83
MZF_1-4
M only
M00075
50.00
174
183
60
69
1
4.711
4.711
0.82
0.82
GATA-1 
M L
M00076
50.00
174
183
60
69
1
7.048
7.048
0.91
0.91
GATA-2 
M L
M00346
50.00
174
183
60
69
1
7.621
7.621
0.83
0.83
GATA-1 
M L
M00462*
50.00
174
183
60
69
1
6.759
6.759
0.89
0.89
Pro only
M L
M00971*
52.63
174
181
60
67
2
5.641
5.641
0.81
0.81
Pro only
M L
M00655*
54.05
175
181
61
67
2
5.359
5.359
0.81
0.81
Pro only
M C L
MA0098
52.78
175
180
61
66
2
7.229
7.229
0.97
0.97
c-ETS
M C L
M00396
54.05
176
182
62
68
2
4.063
4.063
0.83
0.83
En-1 
M C L
M00789*
54.05
176
182
62
68
1
6.466
6.466
0.87
0.87
Pro only
M C L
MA0035
55.56
176
181
62
67
1
4.642
4.642
0.87
0.87
GATA-1
M C L
MA0036
54.29
176
180
62
66
1
6.651
6.651
1.00
1.00
GATA-2
M C L
MA0037
55.56
176
181
62
67
1
5.017
5.017
0.86
0.86
GATA-3
M C L
MA0089
55.56
177
182
63
68
1
4.925
4.925
0.83
0.83
TCF11-MafG
M C L
M00101
54.05
178
184
64
70
1
3.818
3.818
0.85
0.85
CdxA 
M C L
M00077
69.23
206
214
106
114
1
6.417
6.417
0.85
0.85
GATA-3 
M C L
M00101
67.57
206
212
106
112
2
3.208
3.208
0.83
0.83
CdxA 
M C L
M00734*
69.23
206
214
106
114
2
5.566
5.566
0.80
0.80
Pro only
M C L
MA0035
66.67
207
212
107
112
1
4.474
4.474
0.86
0.86
GATA-1
M C L
MA0036
65.71
207
211
107
111
1
4.454
4.454
0.87
0.87
GATA-2
M C L
MA0037
66.67
207
212
107
112
1
5.457
5.457
0.88
0.88
GATA-3
M C L
M00396
70.27
209
215
109
115
1
3.739
3.739
0.81
0.81
En-1 
M C L
M00690*
71.05
209
216
109
116
2
5.331
6.363
0.83
0.87
Pro only
M C L
M00253
68.42
212
219
112
119
2
2.977
3.419
0.82
0.84
cap 
M C L
M00450*
66.67
213
221
113
121
1
7.793
6.580
0.86
0.81
Pro only
M C L
M00726*
69.44
221
226
121
126
1
5.105
5.105
0.84
0.84
Pro only
M C L
M00963*
66.67
221
229
121
129
2
5.535
5.535
0.82
0.82
Pro only
M C L
MA0103
69.44
221
226
121
126
2
5.333
5.333
0.84
0.84
deltaEF1
M C L
MA0109
55.26
245
252
148
155
1
8.287
4.685
0.96
0.81
RUSH1-alfa
M C L
MA0039
52.50
252
261
155
164
2
7.473
7.901
0.88
0.89
Gklf
M C L
M00986*
52.78
255
260
158
163
2
3.573
6.042
0.80
0.91
Pro only
M C L
MA0039
57.50
257
266
160
169
2
8.934
5.667
0.92
0.82
Gklf
M C L
M00964*
59.52
263
274
166
177
2
5.578
8.918
0.81
0.90
Pro only
M C L
M00253
50.00
284
291
185
192
1
5.363
5.325
0.92
0.91
cap 
M C
M00967*
51.28
289
297
190
198
2
7.368
5.474
0.87
0.81
Pro only
M only
M00500*
52.63
293
300
194
201
1
5.142
6.750
0.85
0.90
Pro only
M only
M00747*
54.05
296
302
197
203
1
7.666
6.397
0.88
0.83
Pro only
M only
M00704*
58.33
327
332
204
209
2
7.479
7.955
0.95
0.97
Pro only
M C L
MA0036
57.14
327
331
204
208
2
5.559
5.978
0.94
0.96
GATA-2
M C L
MA0067
68.42
333
340
210
217
1
5.370
5.060
0.85
0.84
Pax-2
M C L
M00253
68.42
335
342
212
219
1
5.713
6.123
0.93
0.95
cap 
M C L
M00413
64.29
339
350
216
227
1
8.302
10.003
0.83
0.88
AREB6 
M C L
M00963*
69.23
339
347
216
224
1
5.009
6.082
0.80
0.84
Pro only
M C L
M00712*
65.79
342
349
219
226
2
5.846
9.546
0.81
0.95
Pro only
M C L
M00726*
69.44
342
347
219
224
2
5.105
7.666
0.84
0.98
Pro only
M C L
M00973*
65.79
342
349
219
226
1
6.262
10.567
0.82
0.97
Pro only
M C L
M01008*
64.10
342
350
219
227
1
5.945
9.762
0.82
0.93
Pro only
M C L
MA0103
69.44
342
347
219
224
1
5.333
9.262
0.84
1.00
deltaEF1
M C L
M00962*
61.54
343
351
220
228
2
7.260
7.260
0.90
0.90
Pro only
M C L
M00921*
60.53
344
351
221
228
1
9.012
9.012
0.96
0.96
Pro only
M C L
M00963*
58.97
344
352
221
229
1
5.724
5.724
0.83
0.83
Pro only
M C L
M00496*
57.89
345
352
222
229
1
4.623
4.623
0.83
0.83
Pro only
M C L
M00497*
57.89
345
352
222
229
1
4.994
4.994
0.86
0.86
Pro only
M C L
M00499*
57.89
345
352
222
229
1
6.810
6.810
0.94
0.94
Pro only
M C L
MA0109
57.89
345
352
222
229
1
4.489
4.489
0.80
0.80
RUSH1-alfa
M C L
MA0080
58.33
347
352
224
229
2
4.644
4.644
0.83
0.83
SPI-1
M C L
MA0032
55.26
367
374
250
257
1
5.823
4.916
0.91
0.86
FREAC-3
M C L
M00724*
51.22
401
411
283
293
2
6.773
5.872
0.83
0.81
Pro only
M C L
M00096
53.85
404
412
286
294
1
5.997
7.871
0.81
0.87
Pbx-1 
M C L
M00241
55.26
406
413
288
295
2
11.098
6.593
1.00
0.82
Nkx2-5 
M C L
M00318*
55.26
406
413
288
295
1
8.578
7.967
0.87
0.85
Pro only
M C L
MA0075
57.14
406
410
288
292
2
4.766
5.937
0.82
0.87
S8
M C L
M00079
51.22
407
417
289
299
1
8.873
8.873
0.80
0.80
Evi-1 
M C L
M00128
53.49
409
421
291
303
1
9.213
6.577
0.89
0.82
GATA-1 
M C L
MA0033
55.26
409
416
291
298
1
6.104
5.446
0.88
0.85
FREAC-7
M C L
MA0063
56.76
409
415
291
297
1
6.024
4.544
0.87
0.81
Nkx
M C L
M00076
52.50
410
419
292
301
1
6.209
6.475
0.88
0.89
GATA-2 
M C L
M00346
52.50
410
419
292
301
1
8.800
9.441
0.87
0.89
GATA-1 
M C L
M00347
52.50
410
419
292
301
1
6.927
8.751
0.81
0.86
GATA-1 
M C L
M00348
52.50
410
419
292
301
1
8.239
8.484
0.85
0.86
GATA-2 
M C L
M00350
52.50
410
419
292
301
1
7.110
7.289
0.81
0.81
GATA-3 
M C L
M00462*
52.50
410
419
292
301
1
7.955
8.234
0.94
0.95
Pro only
M C L
M00077
53.85
411
419
293
301
1
5.913
5.913
0.83
0.83
GATA-3 
M C L
M00278
53.85
411
419
293
301
1
8.372
8.372
0.90
0.90
Lmo2 complex 
M C L
M00747*
54.05
411
417
293
299
2
5.565
5.565
0.80
0.80
Pro only
M C L
MA0109
52.63
411
418
293
300
2
5.284
5.284
0.83
0.83
RUSH1-alfa
M C L
M00203
53.66
412
422
294
304
1
6.088
6.607
0.80
0.82
GATA-X 
M C L
M00396
54.05
412
418
294
300
2
4.063
4.063
0.83
0.83
En-1 
M C L
M00789*
54.05
412
418
294
300
1
8.781
8.781
0.95
0.95
Pro only
M C L
MA0035
55.56
412
417
294
299
1
4.460
4.460
0.86
0.86
GATA-1
M C L
MA0036
57.14
412
416
294
298
1
6.232
6.232
0.98
0.98
GATA-2
M C L
MA0037
55.56
412
417
294
299
1
7.189
7.189
0.95
0.95
GATA-3
M C L
MA0089
55.56
413
418
295
300
1
4.925
4.925
0.83
0.83
TCF11-MafG
M C L
MA0039
60.00
457
466
323
332
2
6.149
5.099
0.84
0.81
Gklf
M C L
MA0080
58.33
458
463
324
329
2
4.721
5.308
0.83
0.86
SPI-1
M C L
M00498*
63.16
460
467
326
333
1
3.804
3.804
0.81
0.81
Pro only
M C L
M00100
62.16
462
468
328
334
2
4.080
4.080
0.81
0.81
CdxA 
M C L
M00073
63.41
477
487
343
353
1
6.894
6.945
0.83
0.83
deltaEF1 
M C L
M00747*
59.46
481
487
347
353
2
10.025
5.982
0.97
0.82
Pro only
M C L
M00272
55.00
497
506
360
369
1
6.633
7.412
0.85
0.87
p53 
M C L
M00747*
62.16
506
512
369
375
1
6.075
6.927
0.82
0.85
Pro only
M C L
M00253
65.79
507
514
370
377
1
4.778
4.058
0.89
0.86
cap 
M C L
MA0063
64.86
512
518
375
381
1
5.612
6.122
0.85
0.87
Nkx
M C L
M00077
66.67
516
524
379
387
1
5.402
5.917
0.81
0.83
GATA-3 
M C L
M00966*
62.75
519
539
382
402
2
10.363
10.510
0.81
0.82
Pro only
M C L
M00964*
64.29
522
533
385
396
1
6.489
6.606
0.84
0.84
Pro only
M C L
M00444*
62.22
523
537
386
400
1
7.678
11.326
0.81
0.90
Pro only
M C L
M00253
63.16
526
533
389
396
1
2.761
3.460
0.81
0.84
cap 
M C L
M00773*
63.41
526
536
389
399
1
7.078
6.864
0.86
0.86
Pro only
M C L
MA0038
62.50
527
536
390
399
2
7.669
6.521
0.85
0.82
Gfi
M C L
M00913*
61.54
528
536
391
399
2
6.145
6.145
0.86
0.86
Pro only
M C L
M00183
62.50
529
538
392
401
2
5.469
6.288
0.81
0.84
c-Myb 
M C L
MA0027
53.66
612
622
618
628
2
4.646
4.914
0.81
0.82
EN-1
M C L
MA0109
57.89
613
620
619
626
2
5.458
5.123
0.84
0.83
RUSH1-alfa
M C L
M00792*
56.41
614
622
620
628
1
6.153
8.913
0.87
1.00
Pro only
M C L
M00032
52.50
615
624
621
630
2
6.551
6.551
0.82
0.82
c-Ets-1(p54) 
M C L
M00253
52.63
616
623
622
629
1
2.716
4.208
0.81
0.87
cap 
M C L
M00655*
54.05
616
622
622
628
1
6.158
6.158
0.84
0.84
Pro only
M C L
MA0032
50.00
618
625
624
631
1
4.560
5.560
0.84
0.89
FREAC-3
M C L
M00087
57.14
633
644
636
647
2
9.009
6.070
0.90
0.80
Ik-2 
M C
M01003*
58.54
634
644
637
647
2
7.152
8.071
0.84
0.87
Pro only
M C L
MA0098
55.56
635
640
638
643
1
4.122
3.718
0.83
0.81
c-ETS
M C L
M00986*
55.56
636
641
639
644
2
5.392
3.573
0.88
0.80
Pro only
M C L
M00962*
61.54
641
649
644
652
1
7.767
7.070
0.92
0.90
Pro only
M C L
MA0087
64.86
642
648
645
651
1
6.367
9.767
0.83
0.96
Sox-5
M C L
M00253
63.16
644
651
647
654
1
4.426
3.062
0.88
0.82
cap 
M C L
M00734*
66.67
646
654
649
657
2
6.085
6.085
0.82
0.82
Pro only
M C L
M01022*
67.50
648
657
651
660
2
7.319
10.560
0.84
0.94
Pro only
M C L
M00671*
68.42
649
656
652
659
1
7.053
7.925
0.85
0.88
Pro only
M C L
M00978*
68.29
649
659
652
662
1
8.432
9.028
0.85
0.86
Pro only
M C L
M00805*
69.44
650
655
653
658
2
5.940
9.662
0.84
1.00
Pro only
M C L
M00100
67.57
651
657
654
660
1
4.006
4.006
0.80
0.80
CdxA 
M C L
M00101
67.57
651
657
654
660
1
4.059
4.059
0.86
0.86
CdxA 
M C L
M00253
68.42
651
658
654
661
2
3.587
3.587
0.84
0.84
cap 
M C L
M00462*
65.00
651
660
654
663
1
5.142
5.199
0.83
0.83
Pro only
M C L
M00789*
67.57
653
659
656
662
1
4.401
4.973
0.80
0.82
Pro only
M C L
MA0035
69.44
653
658
656
661
1
5.106
5.106
0.89
0.89
GATA-1
M C L
MA0036
68.57
653
657
656
660
1
5.105
5.105
0.91
0.91
GATA-2
M C L
MA0037
69.44
653
658
656
661
1
4.118
4.118
0.82
0.82
GATA-3
M C L
MA0089
66.67
654
659
657
662
1
8.692
4.456
0.99
0.81
TCF11-MafG
M C L
M00744*
60.00
655
664
658
667
1
6.712
8.861
0.80
0.86
Pro only
M C L
M00684*
55.00
678
687
686
695
1
8.023
6.475
0.89
0.83
Pro only
M C L
M00792*
61.54
746
754
751
759
1
4.967
7.383
0.82
0.93
Pro only
M C L
M00253
55.26
755
762
760
767
2
4.280
4.330
0.87
0.87
cap 
M C L
M00253
68.42
783
790
783
790
2
4.208
4.503
0.87
0.88
cap 
M C L B
M00378
66.67
784
795
784
795
2
7.455
5.833
0.87
0.81
Pax-4 
M C L B
M00253
68.42
785
792
785
792
2
5.835
4.626
0.94
0.89
cap 
M C L B
M00792*
69.23
786
794
786
794
2
5.111
5.111
0.83
0.83
Pro only
M C L B
M00253
65.79
789
796
789
796
2
4.803
4.816
0.89
0.89
cap 
M C L B
M00493*
52.63
847
854
844
851
1
4.796
5.599
0.82
0.86
Pro only
M C L
M00494*
52.63
847
854
844
851
1
5.462
6.010
0.84
0.87
Pro only
M C L
M00498*
52.63
847
854
844
851
1
6.097
5.233
0.90
0.87
Pro only
M C L
MA0075
54.29
847
851
844
848
2
4.766
9.124
0.82
1.00
S8
M C L
M00699*
50.00
867
878
860
871
2
9.661
10.989
0.82
0.85
Pro only
M C L
M00624*
51.35
868
874
861
867
1
4.638
4.638
0.82
0.82
Pro only
M C L
M00630*
51.28
868
876
861
869
1
5.260
7.454
0.81
0.89
Pro only
M C L
MA0050
50.00
868
879
861
872
2
9.318
10.277
0.82
0.84
Irf-1
M C L
M00313*
52.63
870
877
863
870
1
6.601
7.075
0.91
0.94
Pro only
M C L
M00314*
52.63
870
877
863
870
1
6.193
6.669
0.89
0.91
Pro only
M C L
M00315*
52.63
870
877
863
870
1
6.309
6.968
0.90
0.93
Pro only
M C L
M00747*
54.05
871
877
864
870
1
7.666
10.025
0.88
0.97
Pro only
M C L
M00253
52.63
872
879
865
872
1
4.621
6.609
0.89
0.97
cap 
M C L
M00394
56.41
873
881
866
874
2
6.591
5.237
0.87
0.80
Msx-1 
M C L
M00486*
56.41
873
881
866
874
2
4.990
6.843
0.84
0.92
Pro only
M C L
M00494*
57.89
874
881
867
874
1
5.911
5.037
0.86
0.83
Pro only
M C L
M00496*
57.89
874
881
867
874
1
6.286
4.494
0.90
0.82
Pro only
M C L
MA0081
64.86
877
883
870
876
2
5.133
5.133
0.82
0.82
SPI-B
M C L
M00644*
64.86
879
885
872
878
1
5.546
8.216
0.80
0.93
Pro only
M C L
M00189
59.52
955
966
956
967
2
6.368
7.546
0.80
0.83
AP-2 
M C L
M00196
58.14
959
971
960
972
1
13.674
13.945
0.93
0.93
Sp1 
M C L
M00255
59.09
959
972
960
973
1
11.081
10.571
0.89
0.88
GC box 
M C L
M00932*
58.14
959
971
960
972
1
14.004
13.790
0.94
0.93
Pro only
M C L
M00933*
60.00
960
969
961
970
2
13.515
13.839
0.96
0.97
Pro only
M C L
M00008
60.00
961
970
962
971
1
9.499
10.770
0.91
0.96
Sp1 
M C L
M00649*
60.53
961
968
962
969
1
8.309
10.557
0.86
0.94
Pro only
M C L
M00695*
59.46
961
967
962
968
1
7.466
9.502
0.91
0.99
Pro only
M C L
M00931*
60.00
961
970
962
971
1
13.919
15.477
0.96
1.00
Pro only
M C L
M00938*
65.22
961
976
962
977
1
9.613
8.479
0.83
0.80
Pro only
M C L
M00986*
58.33
961
966
962
967
1
4.722
4.722
0.85
0.85
Pro only
M C L
MA0079
60.00
961
970
962
971
1
7.800
8.598
0.86
0.89
SP1
M C L
M00469*
61.54
962
970
963
971
2
5.927
5.927
0.85
0.85
Pro only
M C L
M00470*
61.54
962
970
963
971
2
5.000
5.000
0.80
0.80
Pro only
M C L
M00716*
63.16
962
969
963
970
1
7.102
7.102
0.88
0.88
Pro only
M C L
MA0003
61.54
962
970
963
971
2
5.927
5.927
0.85
0.85
AP2alpha
M C L
M00083
63.16
963
970
964
971
1
6.039
6.039
0.81
0.81
MZF1 
M C L
M00803*
63.89
963
968
964
969
1
8.243
8.243
0.97
0.97
Pro only
M C L
M00940*
65.00
963
972
964
973
2
7.155
7.155
0.83
0.83
Pro only
M C L
M00428*
65.79
964
971
965
972
2
4.134
4.134
0.81
0.81
Pro only
M C L
M00986*
66.67
965
970
966
971
1
7.013
7.013
0.96
0.96
Pro only
M C L
M00428*
68.42
966
973
967
974
2
6.179
5.582
0.89
0.87
Pro only
M C L
M00986*
66.67
966
971
967
972
1
4.346
4.346
0.84
0.84
Pro only
M C L
MA0105
70.73
966
976
967
977
2
9.887
9.727
0.84
0.84
p50
M C L
M00497*
71.05
967
974
968
975
2
3.997
4.862
0.81
0.85
Pro only
M C L
M00253
73.68
969
976
970
977
1
4.889
4.969
0.90
0.90
cap 
M C L
M00322*
65.00
979
988
980
989
2
7.659
7.171
0.86
0.84
Pro only
M C L
M00652*
65.00
979
988
980
989
2
15.042
11.416
1.00
0.89
Pro only
M C L
M00322*
60.00
981
990
982
991
1
7.659
8.241
0.86
0.87
Pro only
M C L
M00652*
60.00
981
990
982
991
1
15.042
11.508
1.00
0.90
Pro only
M C L
M00726*
61.11
983
988
984
989
1
6.502
7.666
0.91
0.98
Pro only
M C L
MA0006
61.11
983
988
984
989
2
4.891
9.197
0.80
0.98
Ahr-ARNT
M C L
M00253
50.00
988
995
989
996
1
4.895
4.496
0.90
0.88
cap 
M C L
M00927*
51.28
988
996
989
997
2
5.974
6.414
0.81
0.83
Pro only
M C L
MA0028
52.50
998
1007
1002
1011
1
9.853
11.535
0.94
1.00
Elk-1
M C L
M00428*
55.26
1000
1007
1004
1011
2
5.934
4.300
0.88
0.82
Pro only
M C L
MA0076
53.85
1000
1008
1004
1012
1
8.852
13.521
0.84
0.97
SAP-1
M C L
MA0081
56.76
1000
1006
1004
1010
1
4.742
8.968
0.80
0.95
SPI-B
M C L
M00743*
55.26
1001
1008
1005
1012
1
7.467
11.090
0.85
0.99
Pro only
M C L
M00971*
55.26
1001
1008
1005
1012
2
7.139
8.639
0.86
0.91
Pro only
M C L
MA0080
58.33
1002
1007
1006
1011
1
5.834
8.711
0.88
1.00
SPI-1
M C L
MA0098
58.33
1002
1007
1006
1011
2
7.797
7.797
1.00
1.00
c-ETS
M C L