Alignment of NM_012437 and chr1:150847992-150851097
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the frame to left to navigate through alignment. Matching bases in coding
regions of cDNA and genomic sequences are colored blue and capitalized. Matching
bases in UTR regions of cDNA and genomic sequences are colored red and
capitalized. Light blue (coding) or orange (UTR) bases mark the boundaries of
gaps in either side of the alignment (often splice sites).
cDNA NM_012437
GGGCTTCAGG ACAATTCGTG ATGGCGGGGG CTGGTTCCGC CGCTGTATCG 50
GGGGCAGGGA CCCCGGTGGC GGGGCCCACA GGCCGCGACC TTTTCGCCGA 100
AGGGCTGCTG GAGTTCCTGC GACCCGCTGT GCAGCAGCTC GACTCTCACG 150
TACACGCCGT CAGAGAGAGC CAGGTAGAGC TCCGGGAACA AATTGACAAC 200
CTAGCCACAG AACTGTGCCG CATAAATGAG GATCAGAAGG TGGCCCTGGA 250
TCTTGACCCC TATGTTAAGA AGCTACTTAA TGCCCGGCGA CGCGTTGTCT 300
TGGTTAACAA CATTCTACAG AATGCTCAGG AACGACTGAG ACGGCTAAAC 350
CACAGTGTTG CCAAGGAAAC AGCCCGCAGG AGAGCAATGC TGGATTCGGG 400
AATTTACCCC CCTGGCTCCC CAGGCAAATA ACAGATGAGC CTATGGACTC 450
AGTAGCACAA GTACTGTTCC CCAGCTGCCT TGTTTCAACA GACATGCAAA 500
GATCCTAGGA GACAGTCCCC ATAGACCTTC AGACATTAAA AAGGGAGCCG 550
TACAGTTTGT TTGAAGCACT TCGTCTTACC CATTTATGTA GGGGCCCCAG 600
GAAACCTACA CACAGCCAGA ATGAGGTTCC CAAAGGACTT ACATTAATTA 650
TGGCTCTTGC TTCCTTTCAC AAATGAGCTG AGGCCTCTAC TTttTTTTTT 700
TTAAGCTGCA TACtTGAGGC TTACCTTCTT CAGGACTAGT TAACCAGAGG 750
GGCTTCCTTT GTATGTTACA TGCCTGGTTA CATGGGCCTG GACAGCATGT 800
CCTCTACCTG TGACTTCTCA TTTTCCTGTT TACACTGGGG ATTTGGAGGG 850
GGCAGGCAAA GTCAAAGTGA ATGACCTCTG TCCACCCACT TTTTTATTGC 900
ACTGGCTTGA ATACAGTAGC AGTGTTGATA GAATCATTTT ATTCAATAAA 950
TACTTAAAAT Gaaaaaaaaa aaaaaaaaaa aaaaaaaa
Genomic chr1 :
ccccggtgtc ttggtggaga cagcatttcc cgggcgcccc ctcacggggc 150847941
ggggcagtgc ggcgcggctc cggttcccgg cggccctcgc ggcaggtttc 150847991
GGGCTTCAGG ACAATTCGTG ATGGCGGGGG CTGGTTCCGC CGCTGTATCG 150848041
GGGGCAGGGA CCCCGGTGGC GGGGCCCACA GGCCGCGACC TTTTCGCCGA 150848091
AGGGCTGCTG GAGTTCCTGC GACCCGCTGT GCAGCAGCTC GACTCTCACG 150848141
TACACGCCGT CAGgtgcccg ggagggaagt tgggggcggg gcctgtctct 150848191
ctggctttgt aggggcgggg ccaagaaagt gttctggctg ggagtgggca 150848241
taaatttagg aaactgattc gaggcgggga ggacaggcgg gaaggccgca 150848291
ggtggagggt tcagcggagg ccggcttctc tcagtacttg gtaaatacgt 150848341
aggggagttc gtttcctgag ctccggtaac tgcctgacct tgtaggcctt 150848391
gtacctcttt gcagAGAGAG CCAGGTAGAG CTCCGGGAAC AAATTGACAA 150848441
CCTAGCCACA Ggtgagtgag catccctgtg tacccggaat tcttcagccc 150848491
actttcagga ccttaggttt ttgccaaccc ctgggctgag tttctgtcac 150848541
ttgcttccag ggcatcaggg ctgccaaagg actcctcctt tcagggatgt 150848591
cttaaatctc taatggctgt ggcccgtttg ggtgcaagtg ttttccatcc 150848641
cattaccagc ctgctttccc tcagaacaag agataagccg ttagatctta 150848691
gctgcacctt acttccatcc ccagAACTGT GCCGCATAAA TGAGGATCAG 150848741
AAGGTGGCCC TGGATCTTGA CCCCTATGTT AAGAAGCTAC TTAATGCCCG 150848791
GCGACGCGTT GTCTTGGTTA ACAACATTCT ACAGAATGCT CAGgtaaaag 150848841
aatatcttac caacagtgat tctttgccct tttttgtaag tcctcaacac 150848891
agtgaaagcc actgtaattt taaaattctt tggggaaagg gaaattcact 150848941
tctcccagta cttgaaaaat acctaggaaa attcgtctca ttctcactat 150848991
tcagttgctg ccatttacat tcttgtgtgt gtgtgtgtga cagtctccct 150849041
ctgtcaccca ggctggagtg cggtggctca atctcagctc gctgcaacct 150849091
ccgccccctg ggctcaagca attctgcctc cgcctcccga gtaactagga 150849141
ctacaagcgt gcacaacgcc cagctaattt ttgtattttt ttgtagaagt 150849191
agggtttctc catgttgccc aggctggtct ggaactcctg ggctcaagtg 150849241
agcttcccac cttggccacc cgaagtgctg agactacagg agtgaaccac 150849291
cacacctggc tatttatttt tatgatacaa ggtctatcac ccaggatgga 150849341
gtgcagtggc atgataaagg ctcactgcag cctctacctc ccaggctcaa 150849391
gcgatccatc cacctcagcc tcccaagtag ctgggactac aggcatgcac 150849441
caccatgtcc agctaatttt tgtatttttt ctagagacag ggtttcacca 150849491
tgttacccag gctggtccca aactcctgca tgcgagtgat ccacctgcct 150849541
gggcctccca aaacgctggg attacaggcg tgagccactg cacccggcct 150849591
gcctggcctt tttttttttt tttttaaata aaaagacagg atcggctggg 150849641
cgcggtggct cttgcctgta atcccagcag tttgggaggc cgaggtggac 150849691
aggtcacctg aggttgggag ttggagacca gcctgaccaa catagagaaa 150849741
ccccgtctct actaaaaata caaaattagc tgggcgtggt agcgcatgcc 150849791
tgtaatccca gctacttggg aggctgagac agaagaatca cttgagcccg 150849841
ggggacggag gttgcggtga gctgagatcg caccattgca cttcagcctg 150849891
ggcaacaaga gcgaaactcc gtctcgggaa aaaaaaaaaa aaaaaaaaaa 150849941
gacaggctat cactatggtg cccaggctgt tctcaaactg ggctcaagtg 150849991
atcttcctgc cacttcctcc taaatggtgc tgggataggc atgagcacca 150850041
tgcctggcct acattttttt ttttttttga gatggagttc tccctctgtc 150850091
acccaggcta gagtgcagtg gcacgatctc atttcattgc aacctccacc 150850141
tcccggtttc aagcgattct cctgcctcag attacaagca cccgccacca 150850191
tgcccagcta atttttttgt attttttagt agagacgggt tttaccatgt 150850241
tggtcaggct ggtcttgaac tcctgacctc aggtaatcca cccgcctcag 150850291
cctcccaaag tgctgggatt acaagtgtga gccaccatgc ccggcctaca 150850341
ttcttatata tacttttgaa gactgacttt gaggtagatc acgcccggta 150850391
tttttcagca cctagttcac ttacactctc aagcctttca cagtggttaa 150850441
gattccaaac cttccttgtc ttgtagGAAC GACTGAGACG GCTAAACCAC 150850491
AGTGTTGCCA AGGAAACAGC CCGCAGGAGA GCAATGCTGG ATTCGGGAAT 150850541
TTACCCCCCT GGCTCCCCAG GCAAATAACA GATGAGCCTA TGGACTCAGT 150850591
AGCACAAGTA CTGTTCCCCA GCTGCCTTGT TTCAACAGAC ATGCAAAGAT 150850641
CCTAGGAGAC AGTCCCCATA GACCTTCAGA CATTAAAAAG GGAGCCGTAC 150850691
AGTTTGTTTG AAGCACTTCG TCTTACCCAT TTATGTAGGG GCCCCAGGAA 150850741
ACCTACACAC AGCCAGAATG AGGTTCCCAA AGGACTTACA TTAATTATGG 150850791
CTCTTGCTTC CTTTCACAAA TGAGCTGAGG CCTCTACTTT TTTTTTTAAG 150850841
CTGCATACgT GAGGCTTACC TTCTTCAGGA CTAGTTAACC AGAGGGGCTT 150850891
CCTTTGTATG TTACATGCCT GGTTACATGG GCCTGGACAG CATGTCCTCT 150850941
ACCTGTGACT TCTCATTTTC CTGTTTACAC TGGGGATTTG GAGGGGGCAG 150850991
GCAAAGTCAA AGTGAATGAC CTCTGTCCAC CCACTTTTTT ATTGCACTGG 150851041
CTTGAATACA GTAGCAGTGT TGATAGAATC ATTTTATTCA ATAAATACTT 150851091
AAAATGatat tctagtttac tctggtatat ggaaaggttc caggagtttg 150851141
tcctttaatt caaagacagc ttcaaattgt gatctgagta tttataatta 150851191
aatgac
Side by Side Alignment
000000001 gggcttcaggacaattcgtgatggcgggggctggttccgccgctgtatcg 000000050
>>>>>>>>> |||||||||||||||||||||||||||||||||||||||||||||||||| <<<<<<<<<
150847992 gggcttcaggacaattcgtgatggcgggggctggttccgccgctgtatcg 150848041
000000051 ggggcagggaccccggtggcggggcccacaggccgcgaccttttcgccga 000000100
>>>>>>>>> |||||||||||||||||||||||||||||||||||||||||||||||||| <<<<<<<<<
150848042 ggggcagggaccccggtggcggggcccacaggccgcgaccttttcgccga 150848091
000000101 agggctgctggagttcctgcgacccgctgtgcagcagctcgactctcacg 000000150
>>>>>>>>> |||||||||||||||||||||||||||||||||||||||||||||||||| <<<<<<<<<
150848092 agggctgctggagttcctgcgacccgctgtgcagcagctcgactctcacg 150848141
000000151 tacacgccgtcag 000000163
>>>>>>>>> ||||||||||||| <<<<<<<<<
150848142 tacacgccgtcag 150848154
000000164 agagagccaggtagagctccgggaacaaattgacaacctagccacag 000000210
>>>>>>>>> ||||||||||||||||||||||||||||||||||||||||||||||| <<<<<<<<<
150848406 agagagccaggtagagctccgggaacaaattgacaacctagccacag 150848452
000000211 aactgtgccgcataaatgaggatcagaaggtggccctggatcttgacccc 000000260
>>>>>>>>> |||||||||||||||||||||||||||||||||||||||||||||||||| <<<<<<<<<
150848716 aactgtgccgcataaatgaggatcagaaggtggccctggatcttgacccc 150848765
000000261 tatgttaagaagctacttaatgcccggcgacgcgttgtcttggttaacaa 000000310
>>>>>>>>> |||||||||||||||||||||||||||||||||||||||||||||||||| <<<<<<<<<
150848766 tatgttaagaagctacttaatgcccggcgacgcgttgtcttggttaacaa 150848815
000000311 cattctacagaatgctcag 000000329
>>>>>>>>> ||||||||||||||||||| <<<<<<<<<
150848816 cattctacagaatgctcag 150848834
000000330 gaacgactgagacggctaaaccacagtgttgccaaggaaacagcccgcag 000000379
>>>>>>>>> |||||||||||||||||||||||||||||||||||||||||||||||||| <<<<<<<<<
150850468 gaacgactgagacggctaaaccacagtgttgccaaggaaacagcccgcag 150850517
000000380 gagagcaatgctggattcgggaatttacccccctggctccccaggcaaat 000000429
>>>>>>>>> |||||||||||||||||||||||||||||||||||||||||||||||||| <<<<<<<<<
150850518 gagagcaatgctggattcgggaatttacccccctggctccccaggcaaat 150850567
000000430 aacagatgagcctatggactcagtagcacaagtactgttccccagctgcc 000000479
>>>>>>>>> |||||||||||||||||||||||||||||||||||||||||||||||||| <<<<<<<<<
150850568 aacagatgagcctatggactcagtagcacaagtactgttccccagctgcc 150850617
000000480 ttgtttcaacagacatgcaaagatcctaggagacagtccccatagacctt 000000529
>>>>>>>>> |||||||||||||||||||||||||||||||||||||||||||||||||| <<<<<<<<<
150850618 ttgtttcaacagacatgcaaagatcctaggagacagtccccatagacctt 150850667
000000530 cagacattaaaaagggagccgtacagtttgtttgaagcacttcgtcttac 000000579
>>>>>>>>> |||||||||||||||||||||||||||||||||||||||||||||||||| <<<<<<<<<
150850668 cagacattaaaaagggagccgtacagtttgtttgaagcacttcgtcttac 150850717
000000580 ccatttatgtaggggccccaggaaacctacacacagccagaatgaggttc 000000629
>>>>>>>>> |||||||||||||||||||||||||||||||||||||||||||||||||| <<<<<<<<<
150850718 ccatttatgtaggggccccaggaaacctacacacagccagaatgaggttc 150850767
000000630 ccaaaggacttacattaattatggctcttgcttcctttcacaaatgagct 000000679
>>>>>>>>> |||||||||||||||||||||||||||||||||||||||||||||||||| <<<<<<<<<
150850768 ccaaaggacttacattaattatggctcttgcttcctttcacaaatgagct 150850817
000000680 gaggcctctacttttttttttttaagctgcatacttgaggcttaccttct 000000729
>>>>>>>>> ||||||||||||| ||||||||||||||||||| ||||||||||||||| <<<<<<<<<
150850818 gaggcctctactt..ttttttttaagctgcatacgtgaggcttaccttct 150850865
000000730 tcaggactagttaaccagaggggcttcctttgtatgttacatgcctggtt 000000779
>>>>>>>>> |||||||||||||||||||||||||||||||||||||||||||||||||| <<<<<<<<<
150850866 tcaggactagttaaccagaggggcttcctttgtatgttacatgcctggtt 150850915
000000780 acatgggcctggacagcatgtcctctacctgtgacttctcattttcctgt 000000829
>>>>>>>>> |||||||||||||||||||||||||||||||||||||||||||||||||| <<<<<<<<<
150850916 acatgggcctggacagcatgtcctctacctgtgacttctcattttcctgt 150850965
000000830 ttacactggggatttggagggggcaggcaaagtcaaagtgaatgacctct 000000879
>>>>>>>>> |||||||||||||||||||||||||||||||||||||||||||||||||| <<<<<<<<<
150850966 ttacactggggatttggagggggcaggcaaagtcaaagtgaatgacctct 150851015
000000880 gtccacccacttttttattgcactggcttgaatacagtagcagtgttgat 000000929
>>>>>>>>> |||||||||||||||||||||||||||||||||||||||||||||||||| <<<<<<<<<
150851016 gtccacccacttttttattgcactggcttgaatacagtagcagtgttgat 150851065
000000930 agaatcattttattcaataaatacttaaaatg 000000961
>>>>>>>>> |||||||||||||||||||||||||||||||| <<<<<<<<<
150851066 agaatcattttattcaataaatacttaaaatg 150851097