Alignment of NM_015740 and chr10:132197520-132201130
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the frame to left to navigate through alignment. Matching bases in coding
regions of cDNA and genomic sequences are colored blue and capitalized. Matching
bases in UTR regions of cDNA and genomic sequences are colored red and
capitalized. Light blue (coding) or orange (UTR) bases mark the boundaries of
gaps in either side of the alignment (often splice sites).
cDNA NM_015740
gGTGACGCCT TCCGGGTGAG CCAAGGCATA GTCCAGTTCC TGCAGCCTTA 50
GGGAGGGGTC CGCCGTGCCC ACACCCAGCC AGACTCGACC ATGCTGTCCC 100
GCCTGCTCAA AGAACACCAA GCCAAGCAGA ACGAACGCAA GGAGCTGCAG 150
GAGAAGAGGA GGAGAGAAGC TATCGCTGCA GCGACCTGCC TGACCGAAGC 200
GTTGGTGGAT CACCTCAACG TGGGTGTGGC CCAGGCCTAC ATGAACCAGA 250
GAAAGCTGGA CCATGAGGTG AAGACTCTAC AGGTCCAGGC TGCCCAGTTT 300
GCCAAGCAGA CAGGCCAGTG GATTGGAATG GTGGAGAACT TCAACCAGGC 350
ACTTAAGGAA ATTGGGGATG TGGAGAACTG GGCTAGGAGC ATCGAGCTGG 400
ACATGCGCAC CATTGCCACT GCGCTGGAAT ACGTCTACAA AGGGCAGCTG 450
CAGTCTGCAC CATCCTAGAC TAAAACCCAC CCCTCTTACT TCACCCTCCT 500
GGACAGGAGG GAAACTGGTG AGCCACGAAT AAAAACACAA GCTTCCATTC 550
T
Genomic chr10 (reverse strand):
aagcaaccaa ccctccactt cgctccttta gctcctcaat accaaccacc 132201181
agatgccaaa agcagaggga ggctcttgcg tcacgtgata ctgcgatcac 132201131
GTGACGCCTT CCGGGTGAGC CAAGGCATAG TCCAGTTCCT GCAGCCTTAG 132201081
GGAGGGGTCC GCCGTGCCCA CACCCAGCCA GACTCGACCA TGCTGTCCCG 132201031
CCTGCTCAAA GAACACCAAG CCAAGCAGAA CGAACGCAAG GAGCTGCAGG 132200981
gtgagctcag cgtccggtcg gtcggcagct cccggccgcg gcctagcttc 132200931
ttccagaggc ctggacctcg ggtaacctcc cagatcaagg agagggcgcc 132200881
ggctagcggg cgacccgagt gccgggcagg gaattggggg cggcacttct 132200831
ggaaactccg tccccttgcc aaccagccct ggtccccttg gcaccactcg 132200781
ggtccctgcg ccacctccct caatcccgcc caggcggcgc ctgagtcccg 132200731
cccctggagc gcgaaacgcg ttgccaattg gcccagccag cttctcaccc 132200681
cggaagtggg aggaattggg gactgcccag tctgccacac agctaaggca 132200631
caactttccc caggcctaga ctgggaatcc tggagttgcc aatccattgc 132200581
ccaaagtagt ggaaaaagga tgtctaggaa gagtcctggg cgtacctgat 132200531
ggagtgtcca ttcccttctc agggccccag tttctttgcc tccaaaataa 132200481
aggggtttgt tttgtttatg tatggaaggt tctttttaag aggtctggca 132200431
ttagttggca gtttctagaa cagtaataag tgcgtgagga cccattagca 132200381
ccatctttca aatacgaagt ctgctccaac ccctttcccc ttccccagAG 132200331
AAGAGGAGGA GAGAAGCTAT CGCTGCAGCG ACCTGCCTGA CCGAAGCGTT 132200281
GGTGGATCAC CTCAACGTGG Ggtatgaacc tcttccctca actccggttt 132200231
cctccatcca ccctggttac acagcatctg ggccagcttt cagaaggacc 132200181
cggtgctcca gtaactcctc tgatctgtcc cctcccccta atgtaacttt 132200131
gtggagactt gagtcagctt tcactctcta acgctgatgg gggcgacagc 132200081
tgcagtggtt gggaaaacag aattcccctc cccacactaa cttccctggc 132200031
acaacttgat gccatctggc caactcgact aacccttata tgtccagctg 132199981
tcacttgggt gggagggaag gacaacctct tccaccacgt accctctttc 132199931
cttcctcacc tcctactctc tggaaagcct gcgaaacaaa tggcaggaac 132199881
aggatggcac agctggtaga agtaaggaag agcctaagcc aagagctgtg 132199831
acaaaaccag gctgtctctt cctttccttc tgggtctcca gggacccttc 132199781
ccccaacctt aaccctcaat gagaagacca gtggtatcca aagacttgga 132199731
aagattccct ggccctgcat gactcataag agtgcagaga tggtgatctg 132199681
attgtctatg ggaagaaagg aggcacatac tatgccttcc gcccagggcg 132199631
agtgacaggc ttggttgcaa atccagagac tgattcatcc aagggagtca 132199581
tgcagggtta gggtcatcaa ccattactca tcttgagggg agattagggg 132199531
gaagaatggc tgtggttggg ggctctggtc tcctttgtct ccagacagct 132199481
ctctcctcct cttctctggt gttcccacac tggcacatcc tttgctacat 132199431
ttgtgacgct ggccagactt ctttctgttt acttgctaga cgccacccca 132199381
cattcgaagc ttagagggca cctaagccaa atcctgatta gaaagggttt 132199331
tgtgttgctc cccacagctc ctattctcca gaaaataaaa caaaggccta 132199281
gtttgtctca gcccttgtca ggtgccctgc ccactttctt gaagcccccc 132199231
cccccaccca gccctttgcc tcctctgccc ccacacattc cagtgggtga 132199181
gggcaccgga tgtggagtct ccttactgac ctagagcttt ggaataggga 132199131
atgaaaaggt catctgctag taagagaggg aacactggtt atgtaaaagg 132199081
gaaagtgaaa aacactggtg gaggatggag agctaacctc ttagcagtga 132199031
tagttaccac agccagcacc ttgactgagc tgagaagtgt cagcactggg 132198981
cagtgtgggt ggggtggtgt tcactcatct gtgtgggtgg gagagttggg 132198931
tctgaaggtg aaagcctgtg atcccagctc ttggactgta gaggcaagag 132198881
gattagatca aggccagctt catccacata gcgagtttgg ggtcatcctg 132198831
ggctacataa gaccctgtct caaaacgggg cctgggaaga accaagaaaa 132198781
tctcttgggg taggctcatt tgacccagga ttcctgagga gggggtgtgg 132198731
tctcccatcc cactccagat ccagggaggg gcctgacttc ctttgcaact 132198681
tcttgcagag ctcactgggc ttcaaatcac agccagatgt gtccctgctg 132198631
ctgctgaatt ttcccacgct cccttttccc tcccagcttc ttcctcaggg 132198581
atatcccccc aggttaacct tccctgcccc agctcagatg cagaaacttc 132198531
ttgagaggat aggaaatggt tactagtcag ctccggactt ggctttcctg 132198481
ggaaccttgg gattggagga aggagcctgc ttcatttggg tcatatccag 132198431
aaaaggccag agtcccaagg tttcctcagt cctccctcct ggctgatctc 132198381
ccacgactgt tataggctgt ttcccctgaa aaccacccca tatgagttgg 132198331
ataagctgac ataccccctc ctccaatcct tagTGTGGCC CAGGCCTACA 132198281
TGAACCAGAG AAAGCTGGAC CATGAGGTGA AGACTCTACA GGTCCAGGCT 132198231
GCCCAGTTTG CCAAGCAGAC AGGCCAGTGG ATTGGAATGG TGGAGAACTT 132198181
CAACCAGGCA CTTAAGgtgg gcctcactca gtacatcact gcctttaact 132198131
gaaccgacat tggctgtctc cagtctcata aatatcccag acctagggtt 132198081
aatgaggaag tggggatggt cccagatact cttttctatg gctatagtat 132198031
cagaaaaact agaaagaaaa agggcaggat ctcaggatat agctcggtga 132197981
catgtttagg gccctagtac atgtctgggt tcaatcccca gcactacaaa 132197931
ataaaagtac tcagaaaacc ctgagtatgg tacatggacc agtgctacca 132197881
gctcgtctgg acgctgatgc aggagatagc ttaagcccag gaattgaagc 132197831
caacctgagc aacactgcag taattcatct caaaagaatg cgagacagac 132197781
agaaaagcag ttgatgggtc tgagtaagcc accccagctg gcctcaatct 132197731
cttctcccct ttcccagGAA ATTGGGGATG TGGAGAACTG GGCTAGGAGC 132197681
ATCGAGCTGG ACATGCGCAC CATTGCCACT GCGCTGGAAT ACGTCTACAA 132197631
AGGGCAGCTG CAGTCTGCAC CATCCTAGAC TAAAACCCAC CCCTCTTACT 132197581
TCACCCTCCT GGACAGGAGG GAAACTGGTG AGCCACGAAT AAAAACACAA 132197531
GCTTCCATTC Tatgtggtgt gtttgaagga gtcactagcg ccccgtaagg 132197481
cagtgggaat tcagaggtgg tttccctgtg gggcaagtgc ctttggtgga 132197431
gggtacccct a
Side by Side Alignment
000000002 gtgacgccttccgggtgagccaaggcatagtccagttcctgcagccttag 000000051
>>>>>>>>> |||||||||||||||||||||||||||||||||||||||||||||||||| <<<<<<<<<
132201130 gtgacgccttccgggtgagccaaggcatagtccagttcctgcagccttag 132201081
000000052 ggaggggtccgccgtgcccacacccagccagactcgaccatgctgtcccg 000000101
>>>>>>>>> |||||||||||||||||||||||||||||||||||||||||||||||||| <<<<<<<<<
132201080 ggaggggtccgccgtgcccacacccagccagactcgaccatgctgtcccg 132201031
000000102 cctgctcaaagaacaccaagccaagcagaacgaacgcaaggagctgcagg 000000151
>>>>>>>>> |||||||||||||||||||||||||||||||||||||||||||||||||| <<<<<<<<<
132201030 cctgctcaaagaacaccaagccaagcagaacgaacgcaaggagctgcagg 132200981
000000152 agaagaggaggagagaagctatcgctgcagcgacctgcctgaccgaagcg 000000201
>>>>>>>>> |||||||||||||||||||||||||||||||||||||||||||||||||| <<<<<<<<<
132200332 agaagaggaggagagaagctatcgctgcagcgacctgcctgaccgaagcg 132200283
000000202 ttggtggatcacctcaacgtggg 000000224
>>>>>>>>> ||||||||||||||||||||||| <<<<<<<<<
132200282 ttggtggatcacctcaacgtggg 132200260
000000225 tgtggcccaggcctacatgaaccagagaaagctggaccatgaggtgaaga 000000274
>>>>>>>>> |||||||||||||||||||||||||||||||||||||||||||||||||| <<<<<<<<<
132198297 tgtggcccaggcctacatgaaccagagaaagctggaccatgaggtgaaga 132198248
000000275 ctctacaggtccaggctgcccagtttgccaagcagacaggccagtggatt 000000324
>>>>>>>>> |||||||||||||||||||||||||||||||||||||||||||||||||| <<<<<<<<<
132198247 ctctacaggtccaggctgcccagtttgccaagcagacaggccagtggatt 132198198
000000325 ggaatggtggagaacttcaaccaggcacttaag 000000357
>>>>>>>>> ||||||||||||||||||||||||||||||||| <<<<<<<<<
132198197 ggaatggtggagaacttcaaccaggcacttaag 132198165
000000358 gaaattggggatgtggagaactgggctaggagcatcgagctggacatgcg 000000407
>>>>>>>>> |||||||||||||||||||||||||||||||||||||||||||||||||| <<<<<<<<<
132197713 gaaattggggatgtggagaactgggctaggagcatcgagctggacatgcg 132197664
000000408 caccattgccactgcgctggaatacgtctacaaagggcagctgcagtctg 000000457
>>>>>>>>> |||||||||||||||||||||||||||||||||||||||||||||||||| <<<<<<<<<
132197663 caccattgccactgcgctggaatacgtctacaaagggcagctgcagtctg 132197614
000000458 caccatcctagactaaaacccacccctcttacttcaccctcctggacagg 000000507
>>>>>>>>> |||||||||||||||||||||||||||||||||||||||||||||||||| <<<<<<<<<
132197613 caccatcctagactaaaacccacccctcttacttcaccctcctggacagg 132197564
000000508 agggaaactggtgagccacgaataaaaacacaagcttccattct 000000551
>>>>>>>>> |||||||||||||||||||||||||||||||||||||||||||| <<<<<<<<<
132197563 agggaaactggtgagccacgaataaaaacacaagcttccattct 132197520